Halobacterium salinarum R1: OE_4142F
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Entry
OE_4142F CDS
T00662
Symbol
rfcC
Name
(GenBank) replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OE_4142F (rfcC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsl03032
]
OE_4142F (rfcC)
DNA replication proteins [BR:
hsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
OE_4142F (rfcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
RCF1-5-like_lid
Sigma54_activat
DNAX_ATPase_lid
AAA_33
Zeta_toxin
nSTAND3
ATPase_2
Mg_chelatase
nSTAND1
AAA_2
AAA_30
AAA_24
AAA_14
AAA_28
NACHT
ABC_tran
DUF815
AAA_21
AAA_5
FtsK_SpoIIIE
IstB_IS21
AAA_23
RNA_helicase
AAA_18
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
CAP14662
UniProt:
B0R7E3
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All DBs
Position
1656190..1657194
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AA seq
334 aa
AA seq
DB search
MDEPLWIDEHAPSLADLPQASVRDRLRDAVDEPVNLVVYGPSGAGKTAAVRALAAAAHDD
PETDLVEVNVADVFGMTKTEISEDPRFASFIDAKRRRNSSKADLVNHVLKETASYSPVSG
GYNTILLDNAEAIREDFQQALRRVMERHHEATQFIIATRQPSKLIPPIHSRCFPVSVRAP
TDNEVVDVLREIVAAEGVDYEPDGLEFVAGYAEGDLREAVLGAQTTAEQEGEVTMNAAYE
ALQDVGSDAAVESMLDDAEAGAFTDARSTLDDLLVDEGMSGGEVLDDLLEVARSRYSGDD
VAELYALAGDVEFDLTRGTSDRVQLGRLLAELGR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccgctgtggatcgacgagcacgcgccgtcgctggccgacctcccgcaggcg
agcgtgcgcgaccggctccgggacgccgtcgacgaacccgtgaacctcgtggtgtacggg
ccgtcgggcgcggggaagaccgccgccgttcgcgcgctcgcagcggccgcccacgacgat
ccggagacggatctcgtggaggtgaacgtcgcggacgtcttcgggatgacgaaaacggag
atcagcgaggacccccggttcgcgtcgttcatcgacgccaagcgccgccggaactcctcg
aaggccgacctcgtgaaccacgtcctgaaagagaccgcgagctactcgccggtttcgggc
ggctacaacaccatcctgctggacaacgccgaggccatccgggaggacttccagcaggcg
ctgcggcgggtgatggagcgccaccacgaggccacgcagttcatcatcgcgacccgccag
ccgtcgaagctgatcccgccgatccactcgcggtgtttccccgtctcagtgcgcgcgccg
accgacaacgaggtcgtcgacgtgctccgggagatcgtggccgccgagggcgtcgactac
gagccggacggcctggagttcgtcgcggggtacgcggagggcgacctccgggaggccgtg
ttgggcgcgcagacgaccgccgagcaggagggcgaggtgacgatgaacgccgcctacgag
gcgctgcaggacgtcggcagcgacgccgccgtggagtcgatgctcgacgacgccgaggcc
ggcgcgttcaccgacgcacggtcgacgctggacgacctgctggtggacgaggggatgagc
ggcggcgaggtgctcgatgacctgctggaggtcgcgcgctcgcggtattccggcgacgac
gtggcggagctgtacgcgcttgcgggcgacgtggagttcgatctcacgcggggcaccagc
gaccgcgtgcagctcgggcggctgctcgcggagcttggccggtag
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