Halobacterium salinarum R1: OE_4146F
Help
Entry
OE_4146F CDS
T00662
Symbol
tbpE
Name
(GenBank) TATA-binding transcription initiation factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OE_4146F (tbpE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsl03000
]
OE_4146F (tbpE)
03021 Transcription machinery [BR:
hsl03021
]
OE_4146F (tbpE)
Transcription factors [BR:
hsl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
OE_4146F (tbpE)
Transcription machinery [BR:
hsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OE_4146F (tbpE)
RNA polymerase III system
TFIIIB
OE_4146F (tbpE)
RNA polymerase I system
SL1/TIF-1B
OE_4146F (tbpE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
CAP14665
UniProt:
B0R7E6
LinkDB
All DBs
Position
1658660..1659220
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFDKLRELSIKVEDDPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPKDAEHAVDKITSRLE
ELGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccaaggaaaccatcaacattgaaaacgtggtcgcctccaccggcatcggg
caggagctcgatctccagagcgtggcgatggacctcgagggcgctgactacgaccccgag
cagttccccggcctggtctaccgcacgcaggacccgaaaagcgccgcactcattttccgc
tcgggcaagatcgtctgcacgggcgcgaaatcaaccgacgacgtacacgagagcctccgc
atcgtcttcgacaagctccgcgagctctcgatcaaggtcgaagacgaccccgagatcgtc
gtccagaacatcgtcacgtccgctgacctcggccgccagctgaacctcaacgccatcgcc
atcgggctgggcctcgagaacatcgagtacgagcccgagcagttccccgggctcgtctac
cgtctcgacgaccccgaggtcgtggcgctgctgttcggctccgggaagctcgtcatcacc
ggcggcaaagagccaaaggacgccgagcacgccgtcgacaagatcacgtcccggctcgag
gagctggggctcctcgactag
DBGET
integrated database retrieval system
