Halobacterium salinarum R1: OE_4165R
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Entry
OE_4165R CDS
T00662
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03030
DNA replication
hsl03410
Base excision repair
hsl03420
Nucleotide excision repair
hsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OE_4165R (pcn)
03410 Base excision repair
OE_4165R (pcn)
03420 Nucleotide excision repair
OE_4165R (pcn)
03430 Mismatch repair
OE_4165R (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsl03032
]
OE_4165R (pcn)
03400 DNA repair and recombination proteins [BR:
hsl03400
]
OE_4165R (pcn)
DNA replication proteins [BR:
hsl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
OE_4165R (pcn)
DNA repair and recombination proteins [BR:
hsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
OE_4165R (pcn)
MMR (mismatch excision repair)
Other MMR factors
OE_4165R (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
OE_4165R (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
CAP14676
UniProt:
B0R7F7
LinkDB
All DBs
Position
complement(1666815..1667558)
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AA seq
247 aa
AA seq
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MFKAIVSADTLQETLDSVSVLVDECKIHLDDDTLSIRAVDPASVGMVDLDLAATAFESYE
ADGGLIGVNLSRLEDIAGMADAGQLIQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLPAHVAIEGRDIDRAVTAADMVSDHIALGVDTGDDLFYVNAEGDTDDVHLELAP
DQLIDLDAGDAHSLFSLDYLKDMNKAIPTTAEVELELGDEFPIKLHFDIADAQGHVTYML
APRIQSN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcgatagtaagcgccgacacgctccaggagacactcgactccgtgagcgtg
ctggtggacgagtgcaagatccacctcgacgacgacaccctctccattcgcgcagtcgac
cccgccagcgtcggcatggtcgacctcgatctcgccgccactgcgttcgaatcctatgaa
gccgacggcggcctcatcggcgtcaatctctcccggctggaggacatcgcgggcatggcc
gacgccggccagctcatccaactggaactcgacgaggaaacccgcaagctccacatccag
atcgacggcctcgaatacacgcttgcgctcatcgaccccgactcgatccgccaggaaccg
gacatcccggacctcgatctgcccgcgcacgtcgccatcgaaggccgcgacatcgaccgc
gcggtcaccgccgccgacatggtctccgaccacatcgcgctcggcgtcgacaccggcgac
gacctgttctacgtcaacgccgaaggcgacaccgacgacgtccacctcgaactcgcgccc
gaccagctcatcgacctcgacgccggcgacgcccacagcctgttcagcctcgactacctc
aaggacatgaacaaggccatcccgacgaccgcggaggtcgaactcgaactcggcgacgag
ttccccatcaagctgcacttcgacatcgccgacgcacaaggccacgtcacgtacatgttg
gccccgcgcatccagtccaactga
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integrated database retrieval system