Halobacterium salinarum R1: OE_4177F
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Entry
OE_4177F CDS
T00662
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine-2'-O-) methyltransferase
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
hsl
Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsl03009
]
OE_4177F (rlmE)
Enzymes [BR:
hsl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
OE_4177F (rlmE)
Ribosome biogenesis [BR:
hsl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OE_4177F (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
TRAM
Methyltransf_31
Methyltransf_23
Methyltransf_25
Methyltransf_12
CoV_Methyltr_2
Motif
Other DBs
NCBI-ProteinID:
CAP14682
UniProt:
B0R7G3
LinkDB
All DBs
Position
1672311..1673090
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AA seq
259 aa
AA seq
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MGNRKDHYYNKSKQEGYRSRAAYKLQQLDDRFDVLFGGASVVDLGAAPGGWLQVAAERAG
ARGKVVGVDFQSITQFETDAGLETVRGDMTEDETRQRVRDAANGSADVVVSDMAPDMTGE
YDLDHARSVHLARQALETARELLDAGGHFVVKVFDGRDFQDLLADIEDEFAFVATHSPDA
SRDASSELYVVGKNHIVAPIAEGDEHTVEIVDTGDEGDGIARIEGYTLFVDDAAEGDTVD
VTVTDLKPNYGFAERRDGA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccggaaggaccactactacaacaagtccaagcaggaaggctaccggtcgcgg
gcggcctacaagctccaacagctcgacgaccgattcgacgtgctgttcgggggtgcatca
gtcgtggacctgggcgcggcacccgggggctggctgcaggtggccgccgagcgcgccggg
gcacgcgggaaggtcgtcggcgtcgacttccagagcatcacgcagttcgagacggacgcc
ggcctggagacggtgcgcggggacatgaccgaggacgaaaccagacagcgcgtccgggac
gccgccaacggcagcgccgacgtcgtggtgtcggacatggccccggacatgaccggtgag
tacgacctcgaccacgcgcggtccgtgcacctcgcccgccaggccctggagacggcccgc
gagctgctggacgcgggcggccacttcgtcgtgaaggtgttcgacggccgggacttccag
gacttgctggcggacatcgaggacgagttcgcgttcgtcgcgacgcacagcccggacgcc
tcccgggacgcctcctccgagctgtacgtggtgggcaaaaaccacatcgttgcccccatc
gcggagggcgacgagcacaccgtcgagatcgtcgacacgggcgacgagggcgacgggatc
gcgcgcatcgaggggtacaccctgttcgtggatgacgccgccgagggcgacaccgtggac
gtgacggtgaccgacctgaagccgaactacgggttcgccgagcgccgcgacggcgcgtaa
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