Halobacterium salinarum R1: OE_6140R
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Entry
OE_6140R CDS
T00662
Symbol
tfbH
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hsl
Halobacterium salinarum R1
Pathway
hsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OE_6140R (tfbH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsl03021
]
OE_6140R (tfbH)
Transcription machinery [BR:
hsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
OE_6140R (tfbH)
Prokaryotic type
Archaeal type
TFB
OE_6140R (tfbH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
FYVE
RB_B
Cyclin_C
DZR_2
DZR
Zn_ribbon_6
DUF8122
Motif
Other DBs
NCBI-ProteinID:
CAP15279
UniProt:
B0R9J1
LinkDB
All DBs
Position
PHS2:complement(67436..68362)
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AA seq
308 aa
AA seq
DB search
MATSEIYETTFDEDVQTDSSAKQCPECDGRVTTNTVETVCEDCGLVVDEQRIDHGPEWRA
FDEDERERTGAPLTATRHDRGLSTEIGRGTDANGNRLSGRKRRQVARMRREQSRGRFQSK
AERNLAHGLGEVRRIVSALELSEMIRDQACQLFRSAQNEDLLQGRSIEAMATASVYGACR
CDGLSRTLEDVTDPARVEQSRVTNAYKTLNTELGLPAQPVTPSAFVPRLASELDVSDQIR
QRARQLAEASESTGATTGVQPSGFAAACLYKAGREDGRWLTQSDIAEVANVSVVTVRTHR
DTLDELAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagcgagatctacgagacgacgttcgacgaagatgtacagacggactcaagt
gcaaagcagtgtcccgaatgcgacggtcgagtcaccaccaatacggtcgaaacagtctgc
gaggactgtggcctcgtcgtcgacgagcagcgaatcgaccacgggcccgaatggcgagca
ttcgacgaagacgaacgcgaacggacgggtgcgccgctcacggcgacgcggcacgaccgg
gggttgtcgaccgaaatcggtcggggtaccgacgcgaacgggaatagactctccggacgg
aagcgccgtcaggtcgctcggatgcgccgagagcaaagccgggggcggtttcagtcgaaa
gccgagcgcaatctcgcgcacggtctgggtgaggttcgccggatcgtgagcgcacttgag
ctgtccgagatgattcgtgaccaggcctgccagctcttccggagcgcccagaacgaggac
ctcctgcagggccggtcgatcgaagcgatggccaccgcgagcgtctacggcgcctgtcgg
tgcgacggactctcgcgaaccctcgaggacgtcaccgacccggcgcgcgtcgagcaatcg
cgagtgacgaacgcgtacaagacgctgaatacggagcttggccttcctgcccagcccgtg
acgcccagtgcgttcgttccacggttggcgtcggagctcgacgtctccgatcagatccgg
cagcgggctcggcagctggcggaagcatccgaatcgaccggggcaaccacgggggttcag
ccgtccgggttcgctgcagcctgtctgtacaaagccggacgcgaagacgggcggtggctc
acccagtcggacatcgctgaagttgcgaacgtctcggtggtcaccgttcggacccaccgc
gacacactggacgaactggctgtctaa
DBGET
integrated database retrieval system
