KEGG   Halobacterium salinarum R1: OE_7214R
Entry
OE_7214R          CDS       T00662                                 
Symbol
tbpD1
Name
(GenBank) TATA-binding transcription initiation factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hsl  Halobacterium salinarum R1
Pathway
hsl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OE_7214R (tbpD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsl03000]
    OE_7214R (tbpD1)
   03021 Transcription machinery [BR:hsl03021]
    OE_7214R (tbpD1)
Transcription factors [BR:hsl03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    OE_7214R (tbpD1)
Transcription machinery [BR:hsl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     OE_7214R (tbpD1)
  RNA polymerase III system
    TFIIIB
     OE_7214R (tbpD1)
  RNA polymerase I system
    SL1/TIF-1B
     OE_7214R (tbpD1)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: CAP15175
LinkDB
Position
PHS1:complement(141737..142297)
AA seq 186 aa
MSTLTDTIQIENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVIYRLDDPKSATLIFD
SGKAVCTGAQSVDDVHDAISIVVEDLRDLGIDIPPSPPVHVQNIVCSGSLDQDLNLNAIA
IGLGLEDVEYEPEQFPGLVYRLNDPDVVVLLFGSGKLVITGGSNPDDAHHALEIIHERLT
DLGLLE
NT seq 561 nt   +upstreamnt  +downstreamnt
atgagtacactcaccgacaccatccagatcgagaatgtcgtcgcctcgaccgatctcagc
caggagttagccctcgagcaactcgcaactgacctccccggcgctgagtacaatcccggg
gattttcctggtgtcatctaccggctcgacgatccgaaatcggcgacgctcatcttcgac
tctggcaaagctgtctgcaccggcgcccaatctgtcgacgacgtccacgacgccatcagt
atcgtcgtcgaagacctccgcgacctcggtatcgacatcccgcccagtccgccggttcac
gtccagaatatcgtctgcagcggcagtctggaccaagatctgaacctgaacgcgatcgcc
atcggactcggcctcgaagacgtcgaatacgaacccgaacagttccccggcctcgtctat
cgcctcaacgaccccgatgttgtggtgttgttgttcggcagcggcaaactcgtcatcacg
ggtgggagcaacccagacgacgcccaccacgcactcgagatcatccatgagcggctcacc
gacctcggcctcctcgagtaa

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