Histophilus somni 2336: HSM_0316
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Entry
HSM_0316 CDS
T00673
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hsm03012
]
HSM_0316
Translation factors [BR:
hsm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
HSM_0316
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
KAP_NTPase
AAA_18
AAA_29
ATP-synt_ab
TsaE
RsgA_GTPase
DUF815
ABC_tran_CTD
AAA_22
AAA_15
MeaB
CREPT
DUF5382_C
DUF87
ATG16
Motif
Other DBs
NCBI-ProteinID:
ACA31948
LinkDB
All DBs
Position
complement(339930..341849)
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AA seq
639 aa
AA seq
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MILFTNLTLKRGNTLLLENTCATINPGQKVGLVGKNGCGKSSLFALLKKEMSAEEGDITF
PNHWAMAWVNQETPALEISALDYVIKGDREYCKLQKALATATENNHGNDIARIHAQLDTI
DAWTIQARAASLLHGLGFSQEDLTRTVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDAVIWLERWLIQYQGTLILISHDRDFLDPIVNKIIHIEQHKLHEYSVNYSSFEVQRAT
KLAQQTALYRQQQQKINHLQKYIDRFKAKATKAKQAQSRVKALERMELIAPAYVDNPFTF
KFREPLALPNPLVSIEKASAGYDNGESTVEILQKIKLNLVPGSRIGLLGKNGAGKSTLIK
LLAGELTALSGHVQLAKGVKLGYFAQHQLDTLRSEENALWHMQKIAPQQTEQQLRDYLGS
FAFHGDKVTQAVSSFSGGEKARLVLAIIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDY
QGSLVVVSHDRHLLRNTVEEFYLVHDKQVEEFTGDLEDYQKWLNEINSTPKHNEKIINNN
ENTGNHRKEQKRKEAELRQRSAPLRKEIADIERKMQIYQQKLQEIELLLSDTVLYQTENK
AKLTALLNEQVQLKKALEDIEISWFTMQEALENLINNIE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttttacaaatttaactttaaagcgtggaaataccttactcttagaaaatacc
tgtgccactattaaccccggtcaaaaagttggcttagtcggaaaaaatggttgtggtaaa
tcttctttatttgcactactcaaaaaagaaatgagtgctgaagaaggtgatataactttt
ccaaatcactgggcaatggcttgggtaaatcaagaaacacccgccttagaaataagtgcg
ttagattatgttatcaaaggcgatcgtgaatattgcaaattacaaaaggccttagcaact
gctaccgaaaataatcatggcaatgatattgcccgtattcatgcacaattagacacaatt
gatgcttggacaattcaagcgagagcggcttctcttttacatggattggggttttctcaa
gaggatttaacaagaacggttaaatctttctcgggcggttggcgtatgcgtcttaacctt
gcacaagccctgctttgtcgctctgatttactcttattagacgaaccgacaaaccattta
gacttagatgctgtcatttggttagaacgttggttaattcaatatcaaggcaccttgatt
ttaatttcacatgaccgtgattttcttgatcctattgtgaataaaatcattcatattgaa
caacataaactgcatgaatacagtgtcaattattcttcctttgaagtgcaacgtgcaaca
aaattagcacaacaaaccgcactttatcgccaacagcaacaaaaaataaaccatctacaa
aaatatatcgatcgctttaaagccaaagcaactaaagccaaacaagcacaaagtcgagtc
aaagccttagaacgaatggaacttattgcacctgcttatgtagataatccttttaccttt
aaatttcgtgaaccgctcgctttacccaatcccttggtttccattgaaaaagccagtgca
ggttatgacaatggagaaagtacggtggaaattttacaaaaaattaagctcaatttagta
ccaggatctcgtatcgggttgctcggtaaaaatggggcgggtaaatctacgttaattaaa
ttattggcaggggaactgaccgcactttccggtcatgtccaattagcaaaaggcgtaaaa
ttagggtattttgcacagcatcaattggatacgctacgttcggaagaaaatgcactctgg
catatgcaaaaaattgctccacaacaaacggaacaacaattacgtgattacttgggcagt
tttgcttttcatggtgataaagtaactcaagctgtttcttctttttccggcggtgaaaag
gctcgcttggttttagctattattgtttggcaacgcccaaacttattactgctggacgaa
ccgacgaaccacttggatttagatatgcgtcaagccttgacagaagcattaatagattat
caaggttcactggtcgtggtttcccacgatcgccatttactgcgtaatacagtagaagaa
ttttatttggttcatgataaacaagttgaggaatttacaggcgatttagaagactatcaa
aaatggctaaatgaaattaatagcacgccgaaacataatgagaaaatcatcaataataac
gaaaacaccggtaatcatcgcaaagaacaaaaaagaaaagaagctgaactgcgtcaacgg
agtgcaccattacgaaaagaaattgccgatattgaacgcaaaatgcaaatatatcaacaa
aaactacaagaaattgaattacttctttccgatacagtgctttatcagacagaaaataaa
gcaaaactcaccgcacttttaaatgaacaggttcagcttaaaaaagcacttgaagatata
gaaatttcatggttcacaatgcaagaagcattagaaaatttgattaataatatagaataa
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