Histophilus somni 2336: HSM_0382
Help
Entry
HSM_0382 CDS
T00673
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm00260
Glycine, serine and threonine metabolism
hsm00460
Cyanoamino acid metabolism
hsm00630
Glyoxylate and dicarboxylate metabolism
hsm00670
One carbon pool by folate
hsm00680
Methane metabolism
hsm01100
Metabolic pathways
hsm01110
Biosynthesis of secondary metabolites
hsm01120
Microbial metabolism in diverse environments
hsm01200
Carbon metabolism
hsm01230
Biosynthesis of amino acids
hsm01240
Biosynthesis of cofactors
hsm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HSM_0382
09102 Energy metabolism
00680 Methane metabolism
HSM_0382
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HSM_0382
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HSM_0382
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HSM_0382
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HSM_0382
Enzymes [BR:
hsm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HSM_0382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Phage_capsid
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACA32021
UniProt:
B0UWS8
LinkDB
All DBs
Position
complement(436463..437722)
Genome browser
AA seq
419 aa
AA seq
DB search
MLKRSMNIADYDPVLWQAIQDENLRQEEHIELIASENYASPRVMEAQGCQFTNKYAEGYP
GKRYYGGCEYADIVEQLAIDRAKALFGADYANVQPHSGSQANAAVYMALLNPGDTILGMS
LAHGGHLTHGASVSFSGKIYKAEQYGITSEGLIDYDALRKQAHEVKPKMIVGGFSAYSQI
VDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPSPMPHAHVVTTTTHKTLAGPRGGLIL
ANGNEELYKKLNSAVFPAGQGGPLVHVIAAKAVCFKEALEPEFKTYQAQVVKNAKAMVKV
FKQRGYNVVSNGTENHLFLVDLVNHGLTGKAADAALSRANITVNKNAVPNDPQKPFVTSG
IRVGTPAVTRRGFNEEDVAELAGWMCDILDSMNKDNHEQVIADTKEKVLAICKRLPVYP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagaagtatgaatattgccgattacgatccggttttatggcaagccattcaa
gatgaaaatcttcgtcaagaagagcatattgagctaattgcctcagaaaactatgccagc
ccacgagtaatggaagcacaaggttgtcaattcaccaataaatatgcagaaggctatccg
ggtaaacgttattatggcggttgtgaatatgcagatattgttgaacaattagcgattgat
cgggctaaagcgttgttcggtgcagattatgctaacgttcaaccgcactccggctcacaa
gcaaatgcggcggtttatatggcattattaaatccgggggacaccattttaggaatgagc
cttgctcatgggggacatttaactcacggtgcctcggtcagtttctccggtaaaatttat
aaagcggagcaatacggtattacatccgaaggactgattgactatgatgcgttgcgtaaa
caggctcatgaagtgaaaccaaaaatgatcgtcggcggattttctgcctattctcaaatc
gttgactgggcaaaaatgcgtgaaattgccgatgaagtaggtgcatatttatttgttgat
atggcacatgttgcagggcttattgccgccggtgtatatccaagcccaatgccacatgct
catgtagttaccaccacaacacacaaaaccttagcgggacctcgtggagggttaattctt
gccaacggcaatgaagaactttacaaaaaattaaatagtgcggtatttccggcaggacaa
ggcggaccgttagttcatgttattgcagcgaaagccgtttgttttaaagaagctttggaa
cctgagttcaaaacttatcaagcacaagtagtaaaaaatgcaaaagctatggtaaaagtt
tttaaacaacgtggttacaacgttgtctctaacggtacagaaaaccatttattcttagtt
gatttagtcaatcatggcttaaccggtaaagcggctgatgcggcgttaagtcgtgccaat
attactgttaataaaaatgcggttcctaatgatccgcaaaaaccgttcgttacctcaggt
attcgtgtgggaacacctgctgtaactcgtcgaggcttcaacgaagaagatgtggcggaa
cttgccggttggatgtgcgatattttagacagtatgaataaagataaccatgaacaagtc
attgctgatactaaagaaaaagtattagcaatttgcaaacgtcttcctgtttatccataa
DBGET
integrated database retrieval system
