Histophilus somni 2336: HSM_0423
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Entry
HSM_0423 CDS
T00673
Name
(GenBank) ABC transporter related
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
hsm
Histophilus somni 2336
Pathway
hsm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HSM_0423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_0423
Transporters [BR:
hsm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HSM_0423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_29
AAA_16
AAA_30
AAA_15
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACA32067
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Position
487887..489725
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AA seq
612 aa
AA seq
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MLNKIFVWFESRLNPYPEQTFNHLHQGLFRFIWSNLEGMKKWIFLLAFLSFGLGAMEAIL
FQFMGVLVEWLSQYDVQTLWVEKGAYLVGMLILLLFSIIWSFLASATRLQTLQGVFPMRL
RWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALALRDTVLTLADMMVYILVYFVTSGIVL
AALDIWLLVPFVLWLIVFVVILWIVIPELAKKAEQQADSRSLMTGRITDAYANISTVKLF
SHGAREAAYAKRSMQDFMMTVHAQMRLATSLDTLTYSTNVALTLSTGILGIVLWGKGLVG
VGAIATALAMALRVNGLSRWIMWEMARLFENIGTVNDGMSTLTKPLTIVDKPDAQDLEIK
QGNIHFNNVDFAYTPDKPLLTNFNLHIKAGEKVGLIGRSGAGKSTIVNLLLRFYETQQGS
ITIDGQSVADVSQESLRRQIGLVTQDTSLLHRSVRDNIVYGRPEATEEEMVEAAKRAEAA
EFIPFLSDSQGRQGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEV
EIAIQNSLDKMMENKTVIAIAHRLSTIAAMDRLIVLDQGRIVEQGTHTELLEKNGLYAKL
WQHQSGGFLSEY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaatttttgtgtggtttgaaagtcgtttaaatccttatccggaacagacg
ttcaatcacctacatcaaggtctgtttcgatttatttggtcaaatttggaaggaatgaaa
aaatggattttcctacttgctttcttatcgttcggattgggggcaatggaggcaattctt
ttccaatttatgggcgttttggtggaatggctcagtcaatatgacgtgcaaactttatgg
gtagaaaaaggtgcttatttagttgggatgttgattttattgctatttagcattatatgg
tcttttttagcatcagctacacgtttgcaaaccttacaaggtgtttttccaatgcgtttg
cgttggaattttcatcgtttgatgttggggcaaagtttaagtttttatcaagatgaattt
gccggtcgagtgtctgcaaaagtcatgcaaacagcgttggcattgcgtgatacagtgctt
actttggcagacatgatggtttatattttggtctattttgttacctcaggtattgtttta
gcagcattagatatatggttattagttccttttgttctatggctaatagtttttgtggtt
attttatggattgttattcctgaattggctaaaaaagcagaacaacaagcggactcaaga
tcattaatgacaggtagaattactgatgcttatgccaatatttccactgttaagcttttt
tctcatggtgcaagagaggcagcttatgcaaagcgatccatgcaagattttatgatgact
gttcatgcacaaatgcgtcttgctacttccttagatactctgacttatagcacaaatgta
gcgttaactttaagtacgggaattctagggattgtgttatggggaaaaggtttggtcggt
gtaggagccattgctactgcgttggcaatggcactaagagtgaatggattatctcgttgg
attatgtgggaaatggcacgcttgtttgaaaatatcggtactgtaaatgatggtatgtca
acactgacaaaaccgctaactattgtggataaaccggacgcacaagatttggagattaaa
caaggaaatattcattttaataatgtagactttgcttatacaccggataagcctttacta
acaaattttaatttacatattaaagccggagagaaagtagggctgattggtcgttccgga
gcaggaaagtctacaattgtaaatttattactgcgattttatgaaactcagcaaggttct
atcactattgacgggcagagtgtcgcagatgtttcacaagaaagtttacgtcgccaaatt
ggtttggtcacacaagatacttctttattgcatcgttctgttcgggataatattgtttac
ggtcgtccggaagcgacagaagaagaaatggttgaagctgcaaagcgagcagaggcggcg
gagtttattccatttttgagtgattctcaagggagacaaggttatgatgctcatgtggga
gagcgaggagtaaaactttctggggggcaacgtcagcgtattgctattgctcgagtgatg
ttaaaagatgcaccgattttgttactggatgaagcaaccagtgcgttagattctgaagtg
gaaatcgctattcagaatagtttggacaaaatgatggaaaataaaacagtgattgccatt
gctcatcgtttatccacaattgctgccatggatagattaattgtattagatcaaggacga
attgttgagcaaggcactcatactgaattgctggagaaaaacggtttgtatgcaaagctt
tggcaacatcagagcggtggatttttgagtgaatattag
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