Histophilus somni 2336: HSM_0476
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Entry
HSM_0476 CDS
T00673
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_0476
Transporters [BR:
hsm02000
]
Other transporters
Pores ion channels [TC:
1
]
HSM_0476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toluene_X
Porin_4
OMP_b-brl
DUF2490
OMP_b-brl_3
YadA_anchor
Porin_7
Legionella_OMP
OmpA_membrane
DUF3187
Tnp_DNA_bind
BBP7
Motif
Other DBs
NCBI-ProteinID:
ACA32122
LinkDB
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Position
complement(552218..553408)
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AA seq
396 aa
AA seq
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MQSKINLNGNVSVSAGKALQGQGASGQPITEEATQKNIVPGALIPNMYFVAPINDKFAVG
AAMNVNFGLKSQYKSNYEAGVFGGTTELNSINLNLSGSYRISKGLSIGVGLNAVYAKAKI
ERRAGILDKGVNKLASLPKLKKIFSPLASMVDANSPIVQLQDNNAWGLGWNIGAVYEFNQ
GNRIGIAYHSKVDINFKDSDALRYRLAGSGSIEPYRNRGKLTLHLPDYLEISGFHQLTEK
FAMHYSYKYTKWSRLQSLHAVYDNGQVAFHKDENFDDSSRVALGATYNVNDKLTLRAGIA
YDESAEHPSASIPDTDRTWYSLGATYHFTPNLSVDVGFAHLRGKKRQFKEGYEIGNTVSY
PGNRGQVTNVQLAVVSADYQSTARANLYGLNLSYRF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtctaagattaatctgaatggtaatgtgagtgtttctgccggaaaagctttacaa
ggtcagggagcaagcggacaaccaataaccgaagaagccacacaaaagaatattgttccc
ggtgctttgattcctaatatgtattttgttgcacccattaatgataaatttgctgtcggt
gcggcgatgaatgtgaactttggattaaaaagccaatataaaagcaattacgaagccggt
gtttttggcggaactaccgagctaaattccattaatttaaatttaagcggttcatatcgt
atcagcaaaggcttaagcattggtgtgggattaaatgcggtttatgccaaagcgaaaatt
gagcgtcgtgccggtattttagataagggagttaataaacttgcttctcttcctaaactg
aaaaagattttctcaccactagcctctatggttgatgcaaattcccctatagtgcaatta
caagataacaatgcatggggattgggttggaatatcggtgcagtttatgaatttaatcag
ggtaaccgtatcggtattgcctatcattccaaggtagatattaattttaaagatagcgat
gcattacgttatagacttgctggatctggaagtattgaaccttatagaaatagaggtaaa
ttaacgttacatttaccggactatcttgaaatttccggtttccaccaattaacggaaaaa
ttcgctatgcactatagctataaatatactaaatggagccgtttacaaagtttgcatgcc
gtttatgataacggtcaggtcgcttttcataaagatgaaaactttgatgacagttctcgt
gtagctctaggggcgacttataatgtcaatgataaattaaccttgcgtgcgggtattgct
tatgatgaatccgccgaacatccgagtgcttcaatccccgataccgaccgcacttggtat
agcttgggggcaacctatcatttcacgccaaatctttcggttgacgtaggttttgctcat
ttacgtggtaaaaaacggcaatttaaagagggatatgaaattggaaatactgtatcttat
ccgggtaatagaggtcaggttacaaatgtacagttagccgtagtaagtgcggactaccaa
tcaacggcacgtgccaatttgtacggtttaaatcttagctaccgtttctaa
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