Histophilus somni 2336: HSM_0502
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Entry
HSM_0502 CDS
T00673
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsm03016
]
HSM_0502
Enzymes [BR:
hsm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HSM_0502
Transfer RNA biogenesis [BR:
hsm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSM_0502
Prokaryotic type
HSM_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACA32150
UniProt:
B0URU7
LinkDB
All DBs
Position
complement(580421..581428)
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AA seq
335 aa
AA seq
DB search
MNELAYLQTMPKQTALLKTHCADFVVKEQLGYEMSGDGEFVAVKVRKTDCNTLFVAEKLA
HFAGIPAKNMGYAGLKDRKAITEQWFCLQMPGQPTPDFNQFQLDGVEILEVTRHNRKIRT
GSLDGNHFEILLREAQEDADLKVRLENIKKNGFPNYFTEQRFGRDGHNLTQALRWAKGEI
NVKDRKKRSFYLSAARSEIFNLIVSARIRQGLHHKILVNDILQLSGSHSWFHADQKEDFN
LLQQRLAQQDIQITAPLIGENVQIASDVENEIIAKHQELLYLMHQEKMKSARRPILMQAQ
HLSWSFIPEGLKLTFYLPAGSYATALVRELVNINE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactcgcttatttacaaacaatgccaaaacagaccgcacttttaaaaacacac
tgtgctgattttgttgtgaaagaacaactgggctatgaaatgtccggtgatggcgaattt
gttgctgttaaagtgcgtaaaacagattgtaatactctatttgtcgcagaaaaattggca
cactttgctggtatacctgctaaaaatatgggatatgcaggactcaaagatcgtaaagcg
attacagaacaatggttttgtttacagatgccgggacaacccacacctgactttaatcaa
tttcaacttgatggtgtggaaatccttgaggtaacacgtcacaatcgaaaaattcgcaca
ggaagcttggacggaaaccattttgaaattttactgcgtgaagcacaagaagatgcagat
ctcaaagtgcggttagaaaatatcaagaaaaatgggttcccaaattattttaccgagcaa
cgtttcggacgagatggacacaatttaactcaggctttacgctgggctaaaggtgaaatt
aacgttaaagatcgcaaaaagcgtagtttttatctctccgctgctcgtagtgaaattttt
aacttgattgtatccgctcgtattcgacaaggtctacaccataaaatcttagtaaatgat
attttgcagttatccggctcacacagttggttccatgctgatcaaaaagaagattttaat
ttattacaacaacgtttagcacaacaggatattcaaatcactgcaccattaattggtgaa
aatgtacaaattgccagtgatgtagaaaatgaaattatcgctaaacatcaagaactcctg
tacttaatgcaccaggaaaaaatgaaatcggcacgtcgtccaatacttatgcaagctcaa
cacttaagctggtcatttatacctgagggattaaaactgactttttatttaccagcagga
agttatgcgacagccctcgtaagagaactggttaatattaatgaataa
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