Histophilus somni 2336: HSM_0767
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Entry
HSM_0767 CDS
T00673
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HSM_0767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsm03019
]
HSM_0767
03110 Chaperones and folding catalysts [BR:
hsm03110
]
HSM_0767
03029 Mitochondrial biogenesis [BR:
hsm03029
]
HSM_0767
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsm04147
]
HSM_0767
Enzymes [BR:
hsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HSM_0767
Messenger RNA biogenesis [BR:
hsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HSM_0767
Chaperones and folding catalysts [BR:
hsm03110
]
Heat shock proteins
HSP60 / Chaperonin
HSM_0767
Mitochondrial biogenesis [BR:
hsm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HSM_0767
Exosome [BR:
hsm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HSM_0767
Exosomal proteins of other body fluids (saliva and urine)
HSM_0767
Exosomal proteins of breast cancer cells
HSM_0767
Exosomal proteins of colorectal cancer cells
HSM_0767
Exosomal proteins of bladder cancer cells
HSM_0767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ACA32437
UniProt:
B0USK6
LinkDB
All DBs
Position
884666..886309
Genome browser
AA seq
547 aa
AA seq
DB search
MTAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGI
DKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDG
SGLSDELDVVEGMQFDRGYLSPYFINKPEAATVELDNPFILLVDKKISNIRELLPVLEGV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAATKVATTLKGDNEDQDVGIKLALRAMEAPLRQIVTNAGEEASVVASAVKNGEGNFGYN
AGTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMVTTECMVADLPKEEKADLTGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaagacgtaaaatttggtaatgatgctcgtgtaaaaatgctagcaggtgtg
aatgttttagcagatgcagtaaaagttactttaggacctaaaggtcgcaacgtaatttta
gacaaggcttttggtgcacctactattactaaagacggtgtgtctgtggctcgtgaaatc
gaattggaagataaatttgaaaatatgggtgcacaaatggtgaaagaggttgcctctaaa
gcaaatgatgctgcaggcgatggtacaaccacagcaacagttttggctcaagcgattgtc
agcgaaggtctaaaagcagtagctgccggaatgaatccgatggatttaaaacgtggaatt
gataaagcagttaatgcagtggttgaagagctaaaaattctttctaaaccttgtgaaacg
tcaaaagaaattgaacaggttggtacaatttccgcaaacgccgatgaaactgtcggtaaa
cttattgctcaagcaatggaaaaagtcggtaaagagggggttattaccgttgaggacggt
tccggtctttcagatgaattggatgttgttgagggtatgcaatttgaccgcggttattta
tcaccatacttcattaataaaccggaagccgcaactgttgaattagataatccgtttatt
cttcttgttgataaaaagatctctaatattcgtgaattattaccggtcctagaaggtgta
gcgaaagctggtaaaccattgttaattatcgcagaagatgtggaaggcgaagcacttgca
acgttggttgttaacacgatgcgtggtattgttaaagttgctgcggttaaagccccggga
tttggagatcgtcgtaaagcgatgttacaggatattgctatcttaactgcaggtactgtc
atttcagaagaaatcggaatggagcttgaaaaagcaactcttgaagatttaggtcaagca
aaacgtgtggtgatcaacaaagataacacgactattattgacggtattggtgatgaagct
caaatcaaaggtcgagttgctcaaattcgtcaacaaattgaagaagcaacctccgattat
gataaagaaaaactacaagagcgtgttgcaaaattagccggcggtgttgctgtaattaag
gttggtgcggcaactgaagttgaaatgaaagagaaaaaagatcgtgttgatgatgcgtta
catgcaacgcgtgcagctgttgaagaagggattgttgccggtggtggtgttgcattaatc
cgtgctgcaacaaaagttgcaacaacattaaaaggcgataacgaagatcaagatgtaggt
atcaaacttgctttacgtgcaatggaagcaccacttcgtcaaatcgtaaccaatgcggga
gaagaagcttctgtagttgcaagtgcggttaaaaatggtgaaggaaacttcggttataat
gctggtacggagcagtatggtgatatgatcgcaatgggaattttagatccgactaaagta
actcgttccgcactacaatttgctgcatctatcgcaggattaatggttacaactgaatgt
atggtagccgatctgccgaaagaggagaaagctgatctgacaggcggaatgggtggtatg
ggcggaatgggcggtatgatgtaa
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