KEGG   Histophilus somni 2336: HSM_0767
Entry
HSM_0767          CDS       T00673                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hsm  Histophilus somni 2336
Pathway
hsm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HSM_0767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsm03019]
    HSM_0767
   03110 Chaperones and folding catalysts [BR:hsm03110]
    HSM_0767
   03029 Mitochondrial biogenesis [BR:hsm03029]
    HSM_0767
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hsm04147]
    HSM_0767
Enzymes [BR:hsm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HSM_0767
Messenger RNA biogenesis [BR:hsm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HSM_0767
Chaperones and folding catalysts [BR:hsm03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HSM_0767
Mitochondrial biogenesis [BR:hsm03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HSM_0767
Exosome [BR:hsm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HSM_0767
  Exosomal proteins of other body fluids (saliva and urine)
   HSM_0767
  Exosomal proteins of breast cancer cells
   HSM_0767
  Exosomal proteins of colorectal cancer cells
   HSM_0767
  Exosomal proteins of bladder cancer cells
   HSM_0767
SSDB
Motif
Pfam: Cpn60_TCP1 Fe-ADH
Other DBs
NCBI-ProteinID: ACA32437
UniProt: B0USK6
LinkDB
Position
884666..886309
AA seq 547 aa
MTAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGI
DKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDG
SGLSDELDVVEGMQFDRGYLSPYFINKPEAATVELDNPFILLVDKKISNIRELLPVLEGV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAATKVATTLKGDNEDQDVGIKLALRAMEAPLRQIVTNAGEEASVVASAVKNGEGNFGYN
AGTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMVTTECMVADLPKEEKADLTGGMGGM
GGMGGMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgacagcaaaagacgtaaaatttggtaatgatgctcgtgtaaaaatgctagcaggtgtg
aatgttttagcagatgcagtaaaagttactttaggacctaaaggtcgcaacgtaatttta
gacaaggcttttggtgcacctactattactaaagacggtgtgtctgtggctcgtgaaatc
gaattggaagataaatttgaaaatatgggtgcacaaatggtgaaagaggttgcctctaaa
gcaaatgatgctgcaggcgatggtacaaccacagcaacagttttggctcaagcgattgtc
agcgaaggtctaaaagcagtagctgccggaatgaatccgatggatttaaaacgtggaatt
gataaagcagttaatgcagtggttgaagagctaaaaattctttctaaaccttgtgaaacg
tcaaaagaaattgaacaggttggtacaatttccgcaaacgccgatgaaactgtcggtaaa
cttattgctcaagcaatggaaaaagtcggtaaagagggggttattaccgttgaggacggt
tccggtctttcagatgaattggatgttgttgagggtatgcaatttgaccgcggttattta
tcaccatacttcattaataaaccggaagccgcaactgttgaattagataatccgtttatt
cttcttgttgataaaaagatctctaatattcgtgaattattaccggtcctagaaggtgta
gcgaaagctggtaaaccattgttaattatcgcagaagatgtggaaggcgaagcacttgca
acgttggttgttaacacgatgcgtggtattgttaaagttgctgcggttaaagccccggga
tttggagatcgtcgtaaagcgatgttacaggatattgctatcttaactgcaggtactgtc
atttcagaagaaatcggaatggagcttgaaaaagcaactcttgaagatttaggtcaagca
aaacgtgtggtgatcaacaaagataacacgactattattgacggtattggtgatgaagct
caaatcaaaggtcgagttgctcaaattcgtcaacaaattgaagaagcaacctccgattat
gataaagaaaaactacaagagcgtgttgcaaaattagccggcggtgttgctgtaattaag
gttggtgcggcaactgaagttgaaatgaaagagaaaaaagatcgtgttgatgatgcgtta
catgcaacgcgtgcagctgttgaagaagggattgttgccggtggtggtgttgcattaatc
cgtgctgcaacaaaagttgcaacaacattaaaaggcgataacgaagatcaagatgtaggt
atcaaacttgctttacgtgcaatggaagcaccacttcgtcaaatcgtaaccaatgcggga
gaagaagcttctgtagttgcaagtgcggttaaaaatggtgaaggaaacttcggttataat
gctggtacggagcagtatggtgatatgatcgcaatgggaattttagatccgactaaagta
actcgttccgcactacaatttgctgcatctatcgcaggattaatggttacaactgaatgt
atggtagccgatctgccgaaagaggagaaagctgatctgacaggcggaatgggtggtatg
ggcggaatgggcggtatgatgtaa

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