Histophilus somni 2336: HSM_0971
Help
Entry
HSM_0971 CDS
T00673
Name
(GenBank) Fatty acid metabolism transcriptional regulator FadR
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsm03000
]
HSM_0971
Transcription factors [BR:
hsm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
HSM_0971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FadR_C
GntR
TrmB
HTH_Crp_2
FCD
HTH_24
Fe_dep_repress
HTH_11
PaaX
Rrf2
DnaD_N
HVO_A0261_N
LexA_DNA_bind
HTH_28
MarR
Motif
Other DBs
NCBI-ProteinID:
ACA32658
LinkDB
All DBs
Position
complement(1111398..1112138)
Genome browser
AA seq
246 aa
AA seq
DB search
MFNKKRSMDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAGKIGVTRTTLREVL
QRLNRDGWLNIQHGKPTKVNNIWETAGPNILKTLIQLSPTLKPTVIANVVSLRTRMGEQF
IPEAIKINPQQTFEFFQSLDELDDDEKSYAEFDYNLYHRFSFISDKPVYTLILNSFRTLY
HQVAALFFINPQSRQVELTFYQQLKECCRNGDYQQASVYLVENRERSSAIWKGILTNLPE
NFCEEG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaaagagaagtatggatattcttaaagcacaaagtccggctgcgttagcc
gaagaatatattgtcaaaagcatttggaataatcattttcctgccggctcagatttacct
gcagaacgtgaactagcaggcaaaatcggtgtaacaagaacaacattacgtgaagtatta
cagcgtttgaatcgtgatggttggctaaatattcaacatggtaaaccaaccaaagtaaac
aatatttgggaaacagctggtcccaatattttaaaaacactcattcaattatcacctact
cttaaacctaccgtcattgcaaatgtggtatctttacgtactcgaatgggtgaacaattt
attcctgaagcaataaaaattaatcctcaacaaacgtttgaatttttccaatctttagat
gaattagatgatgatgaaaagagttatgcggaatttgactataacctctatcatcgtttt
agctttatatcggataagcccgtatatactttgattttaaacagttttagaacactttat
catcaagtcgccgcacttttttttattaatccgcaatcacgccaagttgaactcactttc
tatcaacaattgaaagagtgttgtcgaaatggagattatcaacaagccagtgtttatctt
gtggaaaatcgtgaacgtagtagtgctatttggaaaggaatactgacaaatttacctgaa
aatttttgtgaagaaggttaa
DBGET
integrated database retrieval system
