Histophilus somni 2336: HSM_1127
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Entry
HSM_1127 CDS
T00673
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm03030
DNA replication
hsm03410
Base excision repair
hsm03420
Nucleotide excision repair
hsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HSM_1127
03410 Base excision repair
HSM_1127
03420 Nucleotide excision repair
HSM_1127
03440 Homologous recombination
HSM_1127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsm03032
]
HSM_1127
03400 DNA repair and recombination proteins [BR:
hsm03400
]
HSM_1127
Enzymes [BR:
hsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HSM_1127
DNA replication proteins [BR:
hsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HSM_1127
DNA repair and recombination proteins [BR:
hsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HSM_1127
NER (nucleotide excision repair)
GGR (global genome repair) factors
HSM_1127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACA30848
LinkDB
All DBs
Position
complement(1295897..1298752)
Genome browser
AA seq
951 aa
AA seq
DB search
MAKIAENPLVLVDGSSYLYRAFYAFPPLTNSLGEPTGAMYGVLNMLKSLIAQVQPTHIAV
VFDAKGKTFRDEIFEQYKSHRPPMPDDLRQQIQPLHNIIKALGIPLLSVEGVEADDVIGT
LAVQASQQGKNVLISTGDKDMAQLVDDNIMLINTMNNSLLDRDGVIDKYGIPPELIVDYL
ALMGDSSDNIPGVSGVGEKTALGLLQGIGSMAEIYANLEKVAGLSVRGAKKLGEKLSSAK
ADADLSYLLATIKTNVELDITPDQLVLGQNNQDQLIEYFARYEFKRWLNEVISGESSLTK
ATQQEIKLDKTQTNSASESKSAVKKTIKIDRTSYETIDTQEKLNSWLEKLQQADLIAVDT
ETDALDPMRANLVGISFALTNGEACYIPLAHKQAVKEMTQTDLFTESEQNAEQFELVKNQ
LNKETCLAQLKPLLENPSIQKIGQNIKYDLTIFANHHIQLNGVCFDTMLQSYVLDSTGRH
NMGALSERYLGHQVIEFESIAGKGKKQVTFDKIAIAQATEYAAEDADITMKLHQVLWQEL
QQSPSLVKVFNDIELPLVKVLSTMERNGVLIDSQALLKQSEKIARRLTALEQQVYQEAGA
EFNLASTKQLQEILFTKLALPIIAKTPKGAPSTNEDVLETLAQQGHIVPKLLMEHRGLAK
LKSTYTDKLPSMVNKKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIKNEEGRCIRQAFIA
RKGYKIIAADYSQIELRIMAHLSQDNGLIMAFNEGKDIHRSTAAEIFGIPLNEVTSEQRR
SAKAINFGLIYGMSSFGLSNQLGISRANAQKYMDLYFQRYPGVQTFMVDIREKAKEQGYV
ETLFGRRLYLPEINSSNAIRRKGAERVAINAPMQGTAADIIKLAMIAIHNEIKKNDIQMI
MQVHDELVFEVKENKVDEYSALIKSLMENAAHLSVPLIVDIGVGDNWDEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattgctgaaaatccgcttgttcttgtagatggttcttcttatttatatcgt
gcattctatgcttttcctccattaacaaattctcttggcgaaccgacaggtgcaatgtat
ggcgtattgaatatgctaaaaagtttaattgctcaggttcaaccgacccatatagcggtt
gtatttgatgcaaagggaaaaacgttccgtgatgaaatatttgaacaatataaatcccat
cgtccccctatgccagatgatttacgtcaacaaattcagccattacacaatattatcaaa
gcactaggaattccgctgttgtctgttgaaggtgtcgaggctgatgatgtaatcggtaca
ttagcggttcaggcctctcagcagggaaaaaacgttctaattagcaccggcgacaaagat
atggcacaattggttgatgataatattatgttgatcaataccatgaataacagtttactg
gatagagatggtgtaatagacaaatatggtattccgcctgaattaattgttgattattta
gcactaatgggcgacagctccgataatattccgggagttagcggtgtcggtgaaaaaaca
gcattgggattgttgcaaggcattgggagtatggcggaaatttatgcaaatttagaaaaa
gtggctggattatcagttagaggagcaaaaaaactcggggagaaactatcctccgccaag
gcagatgcggatttatcttaccttttagcaacaataaaaaccaacgttgagttagatatt
acaccggatcaactcgtgttggggcaaaataaccaagatcaattgattgaatactttgct
cgttatgaatttaaacgttggctaaacgaagtgataagcggtgaaagctcacttaccaaa
gcaactcagcaagaaattaaacttgataaaactcaaacaaatagtgcctctgagtcgaaa
agtgcggtcaaaaaaacgattaaaatcgaccgcacttcatatgaaactattgatactcaa
gagaaattaaatagttggctggaaaaacttcaacaggcagatcttattgctgttgatacg
gaaaccgatgctttagatcctatgcgagctaatcttgtcggtatttcctttgcactgacc
aacggcgaggcttgctatattcctctggctcataaacaagctgtaaaagaaatgacacaa
acagatttattcactgaatcagaacaaaatgctgaacaatttgagcttgtaaaaaatcaa
ttaaataaagagacgtgtctggcacaattaaagccgttgctagaaaatccgtctattcaa
aaaattggacaaaatattaaatatgatttaactatttttgccaatcatcatattcaatta
aacggtgtttgttttgatacgatgctacaatcctatgtgcttgacagcacaggacgacat
aatatgggtgccttatcggaacgatatttaggacatcaagttattgaatttgaaagtatt
gccggtaaaggaaaaaaacaagtaacgtttgataaaattgccattgctcaagcgacagaa
tatgctgctgaagatgcggatattacaatgaaattacatcaagtcctctggcaagaatta
caacaatcgccaagtttagtgaaggtatttaatgatattgagttgcctttggtaaaagta
ttatcaacgatggaacgcaatggtgtactaattgatagtcaggcattgttaaagcaatct
gaaaaaattgcgagaagattgaccgcacttgagcaacaagtttatcaagaagcgggagca
gaatttaatttagcttcaaccaaacaactacaagaaattctctttactaaattagcctta
cctatcattgcaaaaaccccaaaaggtgcaccttcaacaaatgaagatgtattggaaacg
ctagctcaacagggacatattgtgcctaaattattgatggaacatcgtggattagcaaaa
ttaaaatctacttacactgataaattaccttcaatggtgaacaaaaaaaccggacgagtg
catacatcttatcatcaagcagtaacagcaacgggacgtttatcttccagcgatcccaat
ttacaaaatattccgattaaaaatgaagaaggtcgttgtattcgccaagcctttattgca
cgtaaggggtataaaattattgccgcagactattcacaaattgaattacgaattatggca
catttatctcaagataatggtttgattatggcatttaatgagggaaaagatattcatcgt
tctacggcagctgagattttcggtattccattaaatgaagtaacaagtgaacaacgtcga
agtgcaaaagcaattaactttggcttgatttatggaatgagttcttttggtttatctaat
caacttggtatttcacgggcaaatgctcaaaaatatatggatctatatttccaacgttat
ccgggagtgcaaacttttatggttgatattcgagaaaaagcaaaagagcagggctatgta
gaaacattatttggacgccgtctatatttgcctgaaatcaattcatctaatgcaatacgc
cgtaaaggagctgaacgagtggcgataaatgcaccaatgcagggtactgcggcagatatt
attaaattagctatgattgctattcataacgaaatcaaaaaaaatgatattcaaatgatc
atgcaggttcatgatgaattggtatttgaagtgaaagaaaataaggtagatgaatattct
gcattaattaagtctttaatggaaaatgcggcacatttatcagtcccattaattgtggat
attggtgtgggtgataattgggatgaggcacattaa
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