Histophilus somni 2336: HSM_1203
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Entry
HSM_1203 CDS
T00673
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsm03016
]
HSM_1203
Enzymes [BR:
hsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HSM_1203
Transfer RNA biogenesis [BR:
hsm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HSM_1203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACA30927
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All DBs
Position
1360869..1362014
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AA seq
381 aa
AA seq
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MSVLIKEIQNSPQFQLITTNDRLYEICQQAQQKTVIALDTEFVRTKSFYPKLGLIQLYDG
EQVSLIDPFELNDFSPFIQLLANQKVTKVLHACSEDLEVFQHYFQQLPTPMLDTQIMAAF
LQHGNSIGLATLLKHYFKLEIDKGISRTNWLARPLSDVQLHYAAADVWYLLPLYQRMQQK
LAQTSWQSAVQNDCENLLKKYTQIKDSNNAYFSISGAWKLNSQELMRLKLLAKWRQEEAI
KRNLALNFVIRAEHLILLAQHNPKYTSQLLSIGLSLLEVRIHGKKILQLLEKANKAPAYD
YPPPILRVTDDHRYRVAIKLLQATLREITPADLPTEVLSTKRMLDQLIKWHWIKQDNPHD
LPDLLCGWRREFGLLLLKALH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttaataaaagaaatccaaaattcaccgcagtttcaattgattactacaaat
gatcgtttatatgagatttgccaacaggcacaacaaaaaacggtgattgctttggatact
gagtttgttcgcaccaaaagtttttatcccaaactaggattgattcaactttatgacggt
gagcaagtgagcttaatagatccttttgagttgaatgatttttctccttttattcaactt
ttagccaatcaaaaggtcacaaaagtattgcacgcttgcagtgaggatctggaagttttt
caacattattttcagcagttgccaacgccaatgttagatactcaaattatggcggcattt
ttgcaacatggcaattccattggtttagctacattgctaaaacattatttcaagctggaa
atagataaagggatttctcgcactaattggcttgctcgccctttgtctgacgtacaattg
cactatgctgctgccgatgtatggtatttattgccattatatcaacgtatgcaacaaaaa
ttagctcaaacctcttggcaaagtgcggtgcaaaatgattgtgaaaatttgttgaaaaaa
tatactcagataaaagatagtaacaatgcttatttttctatatctggagcgtggaaatta
aactctcaggaattaatgcgtttaaagctgttagcaaaatggagacaagaagaagcgata
aagcgtaatcttgcattaaattttgttattcgtgcagagcatttgattttattagcacaa
cataatccaaaatatacttcacagctgttatccattggtttatctctgctggaagtgcgt
attcatggtaaaaaaatattacaactcttagagaaagcaaacaaagcaccggcgtatgac
tatccaccaccaattttgcgagtcactgatgatcatcgttatcgtgtagcaattaaattg
ctacaagcaacgttacgggaaatcactccggcagatttaccgactgaagttttgtcaact
aagcgtatgttagatcagctgataaagtggcattggattaaacaagacaatcctcatgat
ttacctgatttgctttgcggatggcgtagggagtttggattattgttattaaaggctttg
cattaa
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