Histophilus somni 2336: HSM_1232
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Entry
HSM_1232 CDS
T00673
Name
(GenBank) ABC-type sugar-binding periplasmic protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hsm
Histophilus somni 2336
Pathway
hsm02010
ABC transporters
hsm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HSM_1232
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HSM_1232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1232
Transporters [BR:
hsm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HSM_1232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Borealin
Peripla_BP_1
zf-H2C2
Motif
Other DBs
NCBI-ProteinID:
ACA30959
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All DBs
Position
1390161..1391270
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AA seq
369 aa
AA seq
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MKQFFHCSLSVVASVVALSFAGNTMANDPFVAEAKQQVATAAAQKTTWDGPTTGPKVQQG
KNIIFIASDMKNGGVLGVIDGMKEATSIAGWKLDILDGAGAVNNQLSALNQAIARKPDAI
VIGGWNPNVAKIPLSKATKNGITLVAWHATPEPGPINKYNIFYNVTSDSDQIAKLSAQLA
VANSDGKAKVVILTDSLYEIALRKANVMKEIIEQCKECQVLEFIDTPLADTSSRMPSLTF
SLLQKYGDNLQYTLAINDLYFDFMTPSLRSANKGEMPYNISAGDGSVTAYQRIRNNNHQF
ATVPEPLNLHGWQLVDELNRAFAGEKPSGYVTPAHLVIKDNVAFDGGNKNLYDPQNGYKE
AYKAIWNVK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttttttcattgtagtttaagtgtagtggcttctgtagtcgcactctctttt
gccggcaacactatggcaaatgatccatttgtcgctgaagcaaaacaacaagttgctaca
gctgctgctcaaaaaacaacttgggatggaccaacaacaggtccaaaagtacaacaagga
aaaaatattattttcattgcttctgatatgaaaaatggcggtgtattaggtgtaattgat
ggtatgaaagaggcaacgagtatagctggctggaaattagatattcttgatggagcaggt
gcggtcaataatcaactttctgctttaaaccaagcgattgctcgtaaacctgatgccatt
gtcattgggggttggaatccaaatgtggcaaaaattccacttagcaaggcaactaaaaat
ggaatcacattggttgcatggcatgctacaccggaaccgggaccaattaataaatataat
attttctataatgtcacctctgattctgaccaaattgctaaactttcagctcaacttgct
gtagcaaactcagatggaaaagcaaaagtggttattcttaccgattcactatatgaaatt
gcgttacgtaaagcgaatgtgatgaaagaaattattgaacaatgtaaagaatgtcaggta
ttagagttcattgatacgccgcttgcagatacctcaagtcgtatgccgagcctaactttt
agtttattacaaaaatatggtgataacttacaatacacacttgctattaacgatctctat
tttgattttatgacaccgtccttacgttctgcaaacaaaggagaaatgccatacaacatt
tctgcaggagatggttcagttactgcctatcaacgtattcggaataataatcatcaattt
gctaccgtaccggaacccctgaatttacatggttggcaattagtggatgaacttaatcgt
gcttttgctggagaaaaaccctctggttatgtcactcctgctcacctagtgattaaagac
aacgtggcatttgatggtgggaataagaacctttatgatccacaaaatggttataaagaa
gcctataaggcgatttggaacgtgaagtaa
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