Histophilus somni 2336: HSM_1255
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Entry
HSM_1255 CDS
T00673
Name
(GenBank) Na? antiporter NhaC
KO
K18218
tetracycline resistance efflux pump
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1255
01504 Antimicrobial resistance genes [BR:
hsm01504
]
HSM_1255
Transporters [BR:
hsm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HSM_1255
Antimicrobial resistance genes [BR:
hsm01504
]
Gene variants
Tetracycline resistance genes
Transporters
HSM_1255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
ACA30984
LinkDB
All DBs
Position
1413975..1415522
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AA seq
515 aa
AA seq
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MELVNYSTSIYSVIPPILALLLAIVTRKVILSLSIGIITGALMLTKDTSILDSIPYLWNH
ISALVYSIEENGSIAFAWDTINIILFLVLLGILTALLTVSGSNQAFAEWAQKRIKGRRGA
KLMAAALVFVTFIDDYFHSLAVGAIARPVTDKFNVSRAKLAYILDSTAAPMCVMMPVSSW
GAYIITLISGLLATYAITDYSPIGAFMAMSSMNFYAIFSILLVFFVAYFSFDIGSMARHE
RLALERGDTEREVEIQTKIKGHVRNLVLPIVVLIVATVAMMMYTGGQALIADGKAFSVLG
AFENTTVGISLVVGGIASVVMVTLCILTDGQISLNEYIKSWGLGAKSMSGAILILCFAWT
INSVVKDMQTGTYLSSLVSGNLPIATLPALLFILGAVMAFSTGTSWGTFGIMLPIAAEIA
SNAAPELMLPCLSAVMAGAVCGDHCSPVSDTTILSSTGAKCNHMDHVTTQLPYALTLAMA
TIVGYLVVGFTLSGLLGFIACGVTLAVLMLILRKR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgtaaattattccacatctatttattcggttattccaccgatattagctttg
ctattagccattgtaactcggaaagtcattttatctttaagcattggtattattaccggt
gctttaatgttgaccaaagatacatccatattggatagtattccttatttgtggaatcat
atctccgctttggtttatagtattgaagaaaacggctcaatcgcatttgcgtgggacaca
ataaatattatcctctttttagttttacttggtattttgaccgcacttttaactgtatcc
ggtagtaaccaagcctttgctgaatgggctcagaaacgtattaaaggtcgtcgtggtgca
aaattaatggcggctgctttggtattcgttacatttattgatgattatttccatagttta
gcggttggtgcaattgcccgtccggttacggataaattcaatgtatctcgagcaaaatta
gcttatattcttgattcaacagcagcacctatgtgcgttatgatgcctgtatccagttgg
ggggcttatatcattaccttgatttcgggactattagcaacttatgccattaccgattac
tctccaatcggtgcatttatggcgatgagttcaatgaatttctatgcaattttctctatt
ttattggtatttttcgtggcttatttttcatttgatattggatcaatggcgagacatgaa
agattggcattagagagaggggatacagaaagagaagttgaaatacaaacaaagataaaa
gggcatgtacgaaatcttgttttgccaatagtggtattgattgtagcaactgtggcaatg
atgatgtataccggcggacaagcattaattgctgacggtaaagcctttagcgtgctgggt
gcatttgaaaacacaacggtagggatttctctcgttgttggtggaattgcctcagtggtg
atggttactctctgtattttaactgatggtcagattagtttaaatgaatatattaaatct
tggggattgggtgcaaaatcgatgtccggtgccattttaattctgtgctttgcatggacg
attaattcggttgtgaaagatatgcaaacagggacatatttatccagccttgtatctggc
aatcttcctattgcaacgttaccggcattacttttcatcctcggtgcagtgatggcattt
tccacaggaaccagctggggaacatttggaataatgctaccaattgccgcagaaattgca
tcaaatgctgcccctgaattaatgttaccttgcttatctgcggtaatggctggtgcagtt
tgtggagatcattgttcccctgtatctgatacaacaattttgtcctctaccggagcgaaa
tgtaaccacatggatcacgtaacaacacaattaccttatgcgttaacattagctatggca
acaattgtaggctacttagttgtcggtttcacgttatccggattgttaggttttatcgct
tgtggcgtaacattagctgttttaatgttaattttaagaaaacgctaa
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