Histophilus somni 2336: HSM_1266
Help
Entry
HSM_1266 CDS
T00673
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1266
Transporters [BR:
hsm02000
]
Other transporters
Pores ion channels [TC:
1
]
HSM_1266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
Porin_4
OMP_b-brl
DUF2490
YadA_anchor
BBP2
Autotransporter
Tnp_DNA_bind
Legionella_OMP
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ACA30994
LinkDB
All DBs
Position
1441896..1443251
Genome browser
AA seq
451 aa
AA seq
DB search
MSLSAAYANAAAFQLAEVSSSGLGRAYAGEAAIADNAAVVATNPALMSLFKANQFSIGGV
YVQSRININGEVNVNVGKGVVQVAEEKADQKKVVPGALVPNLYFVAPINDKFAIGAGMNV
NFGLQSKYKKDYDAGVFGGTTELNSINLNLSGSYRISKGLSIGAGLNAVYAKAKIERHAG
VLDKAIDTIADYNGMVGGIKIPSLQVLVPIFSKLKNGVNTDTLLTQLQDNNAWGFGWNIG
AVYEFNQGNRIGIAYHSKVDINFKDDDALSYQFEAVNIIPVKEKGGLTLHLPDYFEISGF
HQLTAKFAMHYSYKYTKWSRLQSLHATYDNGKVAFHKDEKFHDSSRVALGATYNVNDKLT
LRAGIAYDESADHPSASIPDTDRTWYSLGATYNFTPNLSVDVGFAHLRGKKQQFKEKHKI
GSTGVEFGSIDANYKSTARANLYGLNLNYRF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgttatctgccgcttatgccaatgcggcagctttccaactcgccgaggtatccagt
tccggtttgggacgtgcttatgcaggtgaagcggcgattgctgataatgccgccgttgta
gcgactaaccctgccttaatgagtttgtttaaagcaaatcaattttctataggtggggtt
tatgttcaatctagaattaatataaatggtgaagtaaatgttaatgtagggaagggagtt
gtacaagttgcagaggaaaaagcagatcagaaaaaagttgtacccggtgcattagttccc
aatttgtattttgttgcacctattaatgacaaatttgctatcggtgcgggtatgaatgtc
aactttggattacaaagcaaatataaaaaggattatgatgccggtgtttttggcggaact
actgagctgaattccattaatttaaatttaagcggttcatatcgtatcagcaaaggatta
agcattggagccggattaaatgcggtttatgctaaagcaaaaattgagcgtcatgcgggt
gttctagataaggcaattgatactattgccgattataatggaatggttgggggtatcaaa
attccttcattgcaagtgttagtcccaattttctccaagttaaaaaatggagtgaatacg
gatactctcttaacacaattacaagataataatgcatggggattcggttggaatatcggg
gcggtttatgaatttaatcaaggtaaccgtatcggtattgcctaccactctaaagtagat
attaattttaaagatgatgatgccttgagttatcaatttgaagcagtaaatattatccct
gttaaagagaaaggtgggttaacgctacatttgccggattatttcgaaatttccggtttc
catcaattaacggcaaaattcgccatgcactacagctataaatatactaaatggagccgt
ttacaaagtttacatgccacttatgataacggtaaggttgctttccataaagatgaaaaa
tttcatgacagttcacgtgtagctctaggggcgacttataatgtgaatgataaattaacc
ctgcgtgcaggtattgcttatgatgagtctgccgaccatccgagtgcttcaatccccgat
accgaccgcacttggtatagcttgggtgcaacctataactttacgcctaatctttctgtt
gatgtaggttttgctcatttacgtggtaaaaaacagcaatttaaggaaaagcataagatt
ggaagtacaggtgttgagttcggcagtatagatgcaaactataaatcaacagcacgtgcc
aatttgtacggcttaaatcttaactaccgtttctaa
DBGET
integrated database retrieval system
