Histophilus somni 2336: HSM_1292
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Entry
HSM_1292 CDS
T00673
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsm03016
]
HSM_1292
Enzymes [BR:
hsm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HSM_1292
Transfer RNA biogenesis [BR:
hsm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSM_1292
Prokaryotic type
HSM_1292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACA31023
UniProt:
B0UU15
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All DBs
Position
1473193..1474119
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AA seq
308 aa
AA seq
DB search
MSKPRKKGRDINGIFLLDKSQGMSSNDIMQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYQVIAKLGERTDTSDADGQVVQKREVNIDLAKILTALEQFRGEIM
QVPTMFSALKYQGKALYEYARAGITIEREARPISIFELKFIDYQIPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTRLRRIAVADYPYNKMMTLEQLQQFSEQEDLDLLDQHLLPMES
AVIRLPGLHLTKEQARAVGFGQRIKFLNEQGIQGQVRLISPENLFLGVAVIDENSIVHPQ
RMVVIKPE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccacgtaaaaaagggcgtgatatcaacggtatttttttgttggataaatct
caagggatgagttccaatgacattatgcaaaaagttaaacgtcttttccaagcgaataaa
gcgggacataccggtgccttggatccgctggcaacaggaatgttgccaatttgtttaggt
gaggcaacaaaattttcacaatatttacttgatgcggataaacgttatcaagttatcgct
aaattaggcgagcgtacagatacttctgatgccgatgggcaagttgtgcaaaagcgagag
gtcaatattgatttagcaaaaattttgaccgcacttgagcaatttcgtggtgaaattatg
caagtgcctactatgttttcagcattgaaatatcaaggcaaagctttgtatgaatatgct
cgtgcaggcattactattgagcgtgaagctcgtccaattagtatttttgaattgaagttt
attgactatcaaataccttatttaacattggaagtacattgttctaaaggaacttatatt
agaaccttagtagatgatttaggtgaagtattgggttgtggtgctcatgttactaggttg
cgtcggattgctgttgcagattatccttataacaagatgatgacgttagaacaattgcag
caattctctgaacaggaagatttggatttattggatcaacatttgttacctatggaaagt
gcggttattcgtttacctggattgcacttaacaaaagaacaggcaagagctgtaggattt
ggacaacggattaagtttttaaatgaacaaggcatacaaggacaagtgcggttaatttct
cctgaaaatttatttttgggtgttgctgttattgatgaaaacagcattgtccatcctcag
agaatggttgttattaaacccgaataa
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