Histophilus somni 2336: HSM_1305
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Entry
HSM_1305 CDS
T00673
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HSM_1305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsm03400
]
HSM_1305
Enzymes [BR:
hsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HSM_1305
DNA repair and recombination proteins [BR:
hsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HSM_1305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
ACA31038
LinkDB
All DBs
Position
1487407..1488210
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AA seq
267 aa
AA seq
DB search
MKFISFNINGLRARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPYNLVEHLGYHIYHHGQK
GHYGVALLLKQEPKVIRRGFSTDDENAQKRIIMADLETDFGLLTVINGYFPQGENRQHET
KFPAKEKFYADLQHYVEQEHDRNNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWINRLYNYGLIDTFRHKNPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLER
CVDAGIAFDIRAMEKPSDHAPIWAEFK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatttcatttaatattaatgggttaagagcaagacctcatcaacttgacagg
attgtagagaaatatcagcctgatgttattgggttacaggaaattaaagtgtctgatgaa
gactttccctataatcttgttgaacatttaggctaccatatttatcatcatgggcaaaaa
gggcattatggtgttgctttgttattgaaacaagaacctaaagtaattcgtagaggcttt
tctactgacgatgaaaatgcacaaaagcgtataattatggcggatttagaaacagatttt
gggttgctaacagtaattaatggttattttccgcaaggtgaaaaccgccagcatgaaaca
aagtttccagccaaagaaaaattttatgcggatctgcaacattatgtagagcaagagcat
gacagaaataatccaattttaattatgggggatatgaatatcagcccgacagatttagat
attggtattggtgaagaaaatcgaaaacgttggttgcgtacaggaaaatgctcattttta
ccggaagaaagagaatggataaatcgtctatataattatgggctgattgatacctttcgt
cataaaaatccgacaatcaatgatcaattttcatggtttgattaccgctcaaaaggcttt
gatgataatagagggttacgaattgatcatattttagtgaatcaattattattagaacgt
tgcgttgacgccggtatagcttttgatattagagcgatggaaaaaccatctgatcatgct
ccgatttgggcggaatttaagtga
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