Histophilus somni 2336: HSM_1406
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Entry
HSM_1406 CDS
T00673
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HSM_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsm03400
]
HSM_1406
Enzymes [BR:
hsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HSM_1406
DNA repair and recombination proteins [BR:
hsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HSM_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Helicase_RecD
Viral_helicase1
UvrD-helicase
AAA_22
SH3_13
SLFN-g3_helicase
nSTAND3
AAA_16
ResIII
DEAD
PhoH
TrwB_AAD_bind
AAA_28
NTPase_1
T2SSE
NPHP3_N
FtsK_SpoIIIE
AAA_24
Gal4_dimer
CbiA
ABC_tran
SRP54
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACA31148
LinkDB
All DBs
Position
complement(1605157..1607181)
Genome browser
AA seq
674 aa
AA seq
DB search
MLNILYQLKERKFIQAGDYYFAKLIADKQRELDYSSQVKNLAILLAALCNFHNQQGHTCL
KIENFSFRNLFNLPYAEKSYLIDIKEKIGNITQSEWQNLLINHIAFTQDPINEVKPLVLQ
NNRLYFYRTWQDEHRIAEFLIRTIKQKENQPYPIEKIQGILQKYFPVEHEDNSLKQKHNW
QKIAVATAIHQPFCMITGGPGTGKTTTVTRLLLALQELAEGKLVIRLVAPTGKASERLKI
SMKNSFNLLTKKELIKVSEHIKNAIPFNAETIHSLIGVRFFEEKTKYNKRNPLPIDLLVV
DEASMVDLFLMAKLLQALKPSCKLILLGDKDQLSSVEAGAILAELGTFRQYSISSKLADY
LQQTTGENLEHHADENLIRDCLCNLEGSRRFGKHPYIGKLAQLINQQKIAESWQLFHQYQ
QENNTNDTGEINLVDYSTQYEQTNIDEQPLAHHYSQYCSQLVVQSAVQNYEEYLQLIHKI
TENNLPIKLHIAAIFAAFNKVRFLTALRVGELGSENLNQLIAEQLKKKGLVQFNHSRDFY
IGKPIIITENNSRLGLANGDIALYLAEKQPDGSLKGHFWFENGKAELASRIPEHSPAFTM
TIHKSQGSEFSHTFVVLPCEANPVLCKELVYTGVTRAINQVTIFSDRKIWNMAVSKATER
QSGLGEVLRKLMVD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatattttgtatcaacttaaggaaaggaaatttattcaagctggtgattattat
tttgcaaagttgattgcagataaacaacgggaattagattattcatcacaagttaaaaat
ttagctattttacttgccgcactttgtaattttcataaccaacaaggacatacgtgctta
aaaatagaaaatttttcttttagaaatctgtttaatttaccttatgcggaaaaaagttac
cttattgatattaaagagaaaatagggaatattacacaatctgaatggcaaaatttactc
attaatcatatcgcatttactcaagatcctattaatgaggtaaagcccttggtgctacaa
aataatcgcctatatttttatcgcacatggcaagatgagcatcgaattgccgaattttta
attcgaacaataaaacagaaagaaaatcaaccatatccgatagaaaaaattcaaggcatc
ttacaaaaatacttcccggtagagcatgaagataatagtttaaaacaaaagcataattgg
cagaaaattgctgtagcaacggcaattcatcaacctttttgcatgattacaggtggacct
ggaacaggtaaaacgacaacagttactcgattattattggcattacaggagctggcagag
ggaaaattagttattcgcctggttgccccaactggaaaagcttcagaacgcttaaaaatt
agtatgaaaaattcctttaatttattgacaaaaaaggagttaattaaagttagtgaacat
ataaaaaatgctattccttttaatgctgaaactattcatagtttaattggtgtgcgattt
tttgaagaaaagacgaaatataataaacgtaatccactaccgatagatctcttggtagtg
gatgaagcatctatggtggatttgtttctaatggcgaaattattacaagccttgaaaccg
agttgtaagctgattttgcttggcgataaggatcagttatcctctgttgaagcaggagcg
attttggctgaattaggtacttttagacaatattcaattagttcaaagttagcagattat
ttacagcaaacaacaggggaaaacttagaacatcatgcagatgaaaatcttattcgtgat
tgtttatgcaacttagagggcagtcgtcgtttcggtaaacatccttatattggtaaatta
gctcaattaattaaccaacaaaaaattgctgaaagttggcaattatttcatcaatatcaa
caagaaaataacacaaacgacacgggagaaatcaatttagtggattattctacacaatat
gaacaaactaatattgatgaacagccattagcacaccattattctcaatattgcagtcaa
ttggtcgtgcaaagtgcggtgcaaaattatgaagaatatttgcaacttattcacaaaatt
actgaaaataacttaccgattaaactgcatattgcggctatttttgccgcattcaataaa
gtgagatttttgaccgcacttagggtaggggaactggggagcgaaaatctcaatcaactt
attgcggaacaattaaagaaaaaaggacttgtgcaatttaatcatagtcgtgatttctat
attggaaaaccaatcattattactgaaaataatagccgtctcggattggctaatggtgat
attgcgttgtatttagcagaaaaacaacctgatggtagcttaaaagggcatttttggttt
gaaaatggtaaggctgaattagcaagtcgtattcctgagcatagtccagcatttaccatg
actattcataaatcccaaggttcagaattttcccatacctttgtggttttgccttgtgaa
gccaatcctgttttatgtaaagaactggtttatactggagtaacaagagcaatcaatcaa
gttactattttttccgaccgcaaaatatggaatatggcggtgagtaaagcgactgagcgt
caaagtgggttgggtgaagtattgaggaaattaatggttgattaa
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