Histophilus somni 2336: HSM_1451
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Entry
HSM_1451 CDS
T00673
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K19804
lipopolysaccharide assembly protein B
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
HSM_1451
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Gene cluster
GFIT
Motif
Pfam:
TPR_7
Zn_ribbon_LapB
TPR_14
TPR_19
TPR_2
ANAPC3
TPR_CcmH_CycH
TPR_12
ARM_TT21_5th
TPR_6
TPR_10
TPR_8
RPN6_N
ARM_TT21_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACA31198
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Position
complement(1654725..1655921)
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AA seq
398 aa
AA seq
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MLELLFLLLPIAAAYGWYMGHRSARKDQDTISNKFSRDYVTGINLLLSNQHEKAADLFLD
ILQKQEQENNIETGSQFEAELTLGNLYRSRGEVDRALRIHQALDSSPNYTFEQKLLAKQQ
LAKDFLTIGFYDRAENLYILLIDEPNYAENALQQLAVIYQKTKEWKKAINVAEKLAKISP
TEDNIALAHYYCEYSLTLGSDEQQQAQAIHILKQALNVSKTSVRASILIAERYIVNLEYQ
RAVQHLENVLIQNADYMSEILPALKYCYQELNRLDNFELFLIRASQTGNNSAVDLALSDL
IAEKDGIVAAQTKLHQQLEQNPSTFILHRFIQYQIDAAENGKAKESLILLHKIVGDRIAR
GFDYRCSHCGYQTHKLSWNCPSCRKWEKIKPIVGTEHH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaattacttttcctgcttttaccgattgcagcagcttacggctggtatatgggg
catcgtagtgcaagaaaagatcaagatacgattagcaataaattttctcgtgattatgta
acaggtattaatttattattatctaatcaacacgaaaaagcggctgatctcttccttgat
attctacaaaagcaggaacaagaaaataacattgaaacaggttcacaatttgaggctgaa
ttaaccttaggaaatttatatcgttctcgaggtgaagttgatagagctttgcgtattcat
caagcattggatagcagtccaaattataccttcgaacaaaaacttcttgctaaacaacaa
ttagcaaaagattttttgacgataggcttttatgatcgagctgaaaatctttatatttta
ttgattgacgaaccgaactacgctgaaaatgctttacaacaactagccgtcatttatcaa
aaaacaaaagaatggaaaaaagcgatcaatgttgctgagaaacttgccaaaatttcgcct
acggaagataacattgcattagcacattactactgcgaatattccctgactttaggaagt
gatgagcaacaacaagctcaagcaatccatattttgaaacaagcattgaatgtttcaaaa
acgagtgttagagcctctatcctcatcgctgaacgttatattgtgaatttagaatatcaa
cgtgcggtgcaacatttagaaaatgtgctaatacaaaatgcggattacatgagcgaaatt
ttaccggcattaaaatattgctaccaagaattaaatcggttagacaactttgaacttttt
cttattcgggcaagccaaaccggcaataatagtgcggttgatttagctttatcggatctt
atcgcagaaaaagacggcattgttgcggcacaaactaaattacaccaacaactggaacaa
aacccaagtacatttattttacatcgttttattcaataccaaattgatgctgctgaaaac
ggcaaagcaaaagaaagtttgattttattgcacaaaatcgtgggagatagaattgcacga
ggctttgattatcgttgcagtcattgcggttaccaaacacacaaactatcatggaattgc
ccatcttgtcggaaatgggaaaaaatcaaaccgattgtcggaactgaacaccactaa
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