Histophilus somni 2336: HSM_1484
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Entry
HSM_1484 CDS
T00673
Name
(GenBank) YadA domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1484
Transporters [BR:
hsm02000
]
Other transporters
Pores ion channels [TC:
1
]
HSM_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
YadA_head
ESPR
Motif
Other DBs
NCBI-ProteinID:
ACA31234
LinkDB
All DBs
Position
1689542..1696081
Genome browser
AA seq
2179 aa
AA seq
DB search
MNKIFKTKYDVTTGQCKAVSELASNRQIASSSEKKPKCGANLKRTSLSENLLFNMLISGL
VLFAYPAWATAAQTQVNKEGEIKIDADTLKSSSNSGGSNNNGKGKSDIIIGNDADVDNKS
VASGNNGLGQRVALGNKAYVAGNQAVGIGGDVFAQGYSSIAIGSDDIGETADEKQKNGSG
NDKYSKYAVPLPKAIWQLFVDEGDNFNSKTKNNYAVLQNGNSDGSNGKAKKSSEFYSNGN
GSGKIDRNKDPAKWEEEYAKFNKDAYDKYVEGTQNGGSSNPKNVYSHTWAKGRGAIAIGA
RSIAYGDHSNAMGTLAIAKGNYSSAFGTGTIAFEEGGIAVGNNAYVYREHSIGVGNNVQA
IQKGSMVFGVNSYAGGSGSLALGEYTFANVTMHDEFNGKAEAKKVTEFTKIMEDYKNKYN
AENPDKSPLTFASYTPDSPDEKMNIEDLYTVPNYDTKTIQHVGKQFYRAKTNKQPGTGEE
KAEQSKDSKGTYNQGGIAIGSYSVALGDNALTLGRHAYAKEDSTVAIGNFAFAKDENAFA
LGKAARSMGKDSLAIGVNSEIWSPDAVAIGTGSKVETNADGGVAIGQSATVAMGAGDSIA
IGKNSKAGEKKQAFKTQEVNVGTKGLMFDWGSAGTSENDQEDKKKAVVSVGSAGSERIIT
NVAAGSVMNGSTDAINGGQLYSVIETFGKLGTDILGAEVYDKDKDKGQYGFKASTFDKVN
YHREQPQGQGQQEQKAPTTFKQAIDETITAINKGMIFKAGNDNGGSGNTTTKQLGDTLEF
KGDDKYIKASVDGSAIKYSVEVATSIDDSSTPSSSGGAGAGTTGSTDKLVTASAVKNYVT
TKFGALSSTLNLETDQPTDDSKNKGSINLKTDTLKITGDSNITTSFVSNGEKKLSIKLSE
NLTNISSIGKGSNGTKITFDDSKKEIKLGSVSVSVNDQHKIVIGEGSKSESNHTLAIGNK
AIIGQNAKGSISIASLTNGEQGNIQNAEWAVSIGNKNNVSGGNDIVALGSNITISGEEGK
NKSVVAIGNGTQVKNGKESIAIGVAGNTKIDSAEWAVAIGNNTKVSGGNDILALGSNISI
TGSNNGSVVVLGNGAKASAAENSVVIGKGAESKAQSAVVIGEGATVEGDAGDSVALGKNS
KAKTKKLAPSGLDGNVGTNSLKISWTAGVSRDTNDKKSVFSIGDANSERIITNVAAGTVD
NSSTDAINGGQLKSVIDVFGKLAFDVLGAEKETEKEADKQTVKDGFKKSTFTAVQYKRDP
QPQGQPQGQPQQQAKVPMTFREAINESIAAINKGLIFKGDMPSAVTNGTQNTPHYLGSTI
QIVRLATPANTGTTTTQPATTTPAITAYSGENLITQYSNTNGNAKIEIGFKNAPTFSKVM
LDEEQTYNGVNGNSGSTDWKKELITKGYLEQALDKFKFKVSTGEGDDKTFEIGRGDTLKF
TSGQNIQLTLAKQDGTTSASSATAPTAAPAPTPAPAVASSSSSDVSSNSGGSNGMASSGG
ANGGGSGDASMATTGTAPSTPTSTTSDTSTPTATTPTTAVLNIATTSDLSNISSISSPPK
GANAGTGGSGSAGGNSGTGSNEEVAKLTLEAEKGATFQVGSTGAKVNINDKGISLTPQGA
NSTGGSSGADPSDSPSITIKAGAKPADPKSLDSLDPNNGPSIEFSAKKTSDGKTIGSGKI
TGLADIKSDEKDGTVATNKNYVDGKVEDLNNNRPFDFYLDKEKVVKDKDGNFHKADKPTE
KLSADDMKKVVIKAEPSTAPIGISNVASGLGLPAPEKDEEEKKKAQQKNTELTKAVEETV
KVIGDKAKELSTTAQKVTDLTLAASGLEMAMNAMPEGEEKMKLQTQLEENKKKLEKAKED
LGKAKTALTEAQKGLTKANADYEANYKGYEKVAALVSADSKAELTNVATIGDLQAVAKSG
LKFKGNDDMEIHTALSGTFAIKGEEGANGNKFNSDRTAAGNIKVEMSQDGKGLEVKLSDQ
LKNMTSFETREVEGRKSTLNSNGLIVVNKGADNKVKSATYGAEAMVLSNQENGNKAVVTA
GGVHFATTQAPATGARAGTGVITGLKDLDARSTGDMATNKNYVDEKVGSAVNRLDNAIST
TNRRLQAGIAGALATGGLPITVMPGKSMLAASAGSYKGQSAVALGYSRMSDNGKIMLRLQ
GTSTSTGDVGGSVGVGYQW
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgaataagattttcaaaaccaaatacgatgtaacaacaggtcaatgtaaagccgtgtcc
gagttggcgagcaatcgccaaatagcaagtagctcggagaaaaagccaaagtgcggtgct
aatttgaaaagaacgagcttgtcagaaaacttactgttcaacatgctgatcagcggttta
gtgttgtttgcgtatcccgcttgggcaacagcggctcaaactcaagttaacaaagaagga
gaaatcaaaatagatgctgataccttaaaaagtagtagcaacagtggtggtagcaataat
aatggtaaaggtaaaagcgacatcatcataggtaatgacgctgatgttgacaataagagt
gtagctagcggtaataatggtctcggtcaacgggtagcacttggtaataaagcctatgtc
gcaggcaatcaggcggtggggattggtggtgatgtattcgcccaaggctattcctccatc
gccatcgggagcgatgatatcggcgaaacagctgatgaaaaacaaaaaaatggaagtgga
aatgacaaatactccaaatacgccgtccccctacctaaagccatctggcagttgtttgtg
gatgagggagataattttaattcaaaaacgaaaaataactatgcggttttgcaaaatggt
aatagtgacggtagcaacggcaaagccaaaaagagttcagagttttatagcaatgggaat
ggtagtggaaaaatcgacagaaataaagaccctgctaaatgggaagaagaatatgcaaaa
tttaataaagacgcatatgataaatatgtagaaggcacccaaaacggcggtagcagtaac
cccaaaaacgtctactcccacacttgggcgaaagggcgtggggcgattgccatcggggca
aggtctatcgcctacggtgaccattctaacgccatgggaacgcttgccatcgcaaaagga
aactactcgtccgcctttggtacgggaaccatcgcttttgaagagggcggtatcgccgtg
gggaacaatgcgtacgtttatcgcgaacattccatcggggtgggaaataacgtccaagca
atacaaaaaggctcgatggtcttcggggtcaattcctacgccggtggtagcggttcctta
gcgttaggggaatatacctttgcgaatgtgactatgcatgatgagtttaatgggaaagcg
gaagctaagaaagtaacagaatttacaaaaataatggaggattataaaaataaatataat
gcagagaatcctgacaaatcaccgttaacatttgctagttatacgcctgattcaccagac
gaaaaaatgaatatagaagacctttatactgtgccaaattatgataccaaaacgatacag
catgttggaaaacaattttacagagccaaaacaaataaacaaccaggtacaggcgaagaa
aaagccgaacaatccaaagacagcaaaggcacttataaccaaggcgggatagccatcggg
tcgtattctgtcgcattgggggataacgccctcaccctcggcagacacgcctacgccaaa
gaagacagcacggttgccatcgggaacttcgcctttgcaaaagatgaaaacgccttcgcc
ctcggaaaagccgcccgatccatgggtaaagattccttggcaatcggggtaaattcagaa
atttggagtccagatgccgtggcaatcggcacaggctctaaagtggaaacaaacgccgat
ggcggtgtcgccattggacaaagtgcgacagtggcaatgggtgccggcgattctattgcg
attggtaaaaattctaaggcgggagagaagaaacaagcctttaaaacccaagaagttaat
gtgggtacaaaaggcttgatgtttgactggggcagtgcaggcacctcagaaaatgatcaa
gaggacaagaaaaaagccgtggtcagcgtaggaagtgcaggcagtgaacggattattacc
aatgttgccgctggttctgttatgaacggttccactgatgcgattaacggcggacagttg
tatagtgtgattgaaacattcggcaaactcggcacagatattcttggtgcggaagtatat
gataaggataaggataagggtcagtacggatttaaggcttcaacgtttgacaaagtaaac
tatcatcgagaacagccacagggacaaggacagcaagaacaaaaagcacccacaactttt
aaacaagccattgatgaaaccattactgcgataaataaaggtatgattttcaaagccggt
aatgataatggcggtagtggtaatactacaacaaaacaacttggcgatactttagaattt
aaaggagacgacaagtatatcaaggcgagtgtagatggtagtgctattaaatacagcgta
gaagtagcaactagcatagatgacagttcaaccccatctagttcaggtggagcaggagca
ggaacaacaggttccacggataaattagtaacagcaagtgcggtgaaaaattatgtcacg
acaaaatttggtgcattaagttcaacgttgaatttagaaaccgatcaaccaactgatgac
agtaaaaataaaggttcaatcaatttaaaaaccgatacattaaaaattactggcgatagt
aatatcacgacttcatttgtgtctaatggtgaaaaaaaattaagtataaaacttagtgaa
aatttaactaacatttcttccataggtaaaggtagtaatggtaccaaaatcacatttgat
gatagcaaaaaggaaatcaaacttggatctgtatccgtaagtgtaaatgatcagcataaa
atcgtaatcggtgaaggttccaaatcagaatcaaaccatacacttgcaatagggaataaa
gccataataggtcaaaatgcaaaaggctctatctctatagccagtctaacaaatggtgag
caggggaatatacaaaacgccgaatgggcggtgtctatcggtaataaaaacaacgtttca
ggcggaaatgatattgtcgctttggggtcgaatattactataagcggtgaagagggtaag
aataagtccgtagtggcgataggtaatggaacacaagtaaaaaatggtaaagaatccatc
gctatcggcgtagcaggcaataccaaaatagacagtgcagaatgggcggttgctattggt
aataacaccaaagtatctggcggaaacgacatactagcattgggttctaatatttcaata
actggaagtaataatggaagtgtagtcgtactaggtaatggtgcaaaagctagtgccgca
gaaaacagtgtggttataggtaaaggagcagaatcaaaagcccaaagtgcggtggttatt
ggggaaggtgcaacggttgaaggtgatgctggcgattctgttgcattaggtaaaaattct
aaggcgaaaactaaaaaacttgctccgagtggattagatggtaatgtcggaactaattca
ttaaaaatcagttggactgctggggtttctagagatacaaatgataaaaaatccgtattc
agcattggagatgcaaatagcgaaagaataataaccaacgtcgccgcagggacagtagat
aatagttcaactgatgccatcaatggcggtcaattaaaaagcgtcattgatgtgtttggt
aagttagcatttgatgttctcggagcggaaaaagaaacagagaaagaggcagataaacaa
acagttaaagacggatttaaaaaatcaacatttactgctgttcaatataagagagaccca
caaccacaaggacaaccacaaggacaaccacagcaacaagcaaaagtaccaatgacattc
agagaagcgattaatgaaagcattgctgctattaacaagggcttgatattcaaaggtgat
atgccaagtgcggtaacaaatggtactcaaaacacaccgcactatcttggttcgactatt
cagattgtgcgtttggcaacgcctgcgaacactggcacaacgactacacagccagctaca
actacgccagccatcacggcgtatagtggggagaatttaatcacgcaatatagcaatact
aatggcaacgccaaaatcgaaatcggttttaaaaatgcaccgacatttagcaaagtaatg
cttgatgaagaacaaacatataatggcgtaaatggaaatagcggaagtacagattggaaa
aaagaactcatcactaaaggctaccttgaacaagcgttagataagtttaagtttaaagta
tctactggcgagggtgatgataagacttttgaaatcggtcgtggcgatacgttgaagttt
acgagtggtcaaaatattcaattgactttagcgaagcaagatgggacaacgtctgctagt
agtgcaacagctccaaccgctgcaccagcaccaacgcctgcaccagcagtggcaagcagt
tcgtcaagcgatgtaagttcaaatagcggtggttcaaatggtatggcttcgtcaggtggt
gcaaatggcggtggttcaggcgatgcaagcatggctacgacgggaactgctccaagcacg
ccaaccagcacaacaagcgatacgagtacaccaaccgctactacaccaacaacggcagtg
ttaaacattgccacaactagcgatttaagcaatatcagctcgatttcctcaccgcctaaa
ggagcgaatgcaggtacaggcggaagcggaagtgcgggcggaaattcaggtactggttca
aatgaagaagtcgccaaacttaccttagaagccgagaaaggggcgactttccaagtgggt
agcactggtgcgaaagtgaatatcaatgacaagggtatttcacttacgccacaaggagca
aatagcacaggaggatcaagtggagcagatccatctgactcaccatcaatcactattaaa
gcaggtgcaaaaccggcggatccaaaaagtttagattcacttgatcctaataacggacct
tcaatagagttctcagccaagaaaacaagtgatggtaaaaccattggctcaggcaaaatc
accggtcttgctgatattaagtcagatgaaaaagacggcaccgttgcaaccaacaaaaat
tatgttgatggcaaagtggaagatctgaacaataaccgtccatttgatttttatttagac
aaggaaaaagtcgtgaaagataaagatggaaatttccacaaagcagacaaacctactgaa
aaactttctgccgatgatatgaaaaaagttgttatcaaagccgaaccaagcaccgcacct
attgggattagcaatgtggcgagtgggttgggattgcctgcccctgaaaaagatgaggaa
gaaaagaaaaaggcacagcaaaaaaacactgagctaacaaaagctgttgaggaaacagtg
aaagtaatcggtgataaagctaaagaactttcaactactgctcaaaaagtaacagattta
actttagcagccagcggtttggaaatggcgatgaatgcaatgcctgagggcgaagaaaaa
atgaaacttcaaactcaattggaagaaaataagaaaaagctagaaaaagccaaagaagat
ctaggaaaagcaaaaactgctttaaccgaggcacaaaaaggcttaacaaaagccaatgct
gactatgaagccaactacaagggttatgaaaaagtcgctgccttagtcagtgccgatagt
aaagccgaattaaccaacgtagccacaatcggtgatttgcaggcggtagcgaaatcgggc
ttgaaatttaaaggcaatgatgacatggaaattcacacagcattaagcggtacttttgcg
attaaaggtgaagaaggtgcgaatggcaataaatttaacagcgaccgcactgctgccggt
aatatcaaagtggaaatgtctcaagatggcaaagggcttgaagtcaaactgtccgatcag
ttgaaaaatatgacctcttttgagacacgtgaagtggaggggagaaaatctacgctaaac
agcaatggtttgatagtggtcaataaaggtgcagataacaaagtcaaatcagcaacatac
ggtgcggaagcgatggtgttgtcgaatcaagaaaacggcaataaagccgtggtgaccgct
ggcggtgtccattttgccactacccaagccccagcgacaggggctcgtgcggggacaggc
gtgattacaggcttaaaagacctagacgcacgctcgacaggcgacatggcaaccaacaaa
aactacgtggacgaaaaagttggttccgccgtcaatcgcttggataatgcgatcagtacc
actaacagacgcttgcaggcgggtatcgctggagcattggctacaggaggattgccgata
acggtgatgccaggtaaatctatgttggcagcgtcggctggctcgtataaggggcaaagt
gcagtggcattaggctattctcgcatgagtgataacggcaagataatgctacgcctacaa
ggtacaagcacttcaacgggcgatgtcggcggttcggttggtgtaggctatcaatggtag
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