Histophilus somni 2336: HSM_1513
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Entry
HSM_1513 CDS
T00673
Name
(GenBank) OmpA domain protein transmembrane region-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsm02000
]
HSM_1513
Transporters [BR:
hsm02000
]
Other transporters
Pores ion channels [TC:
1
]
HSM_1513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF6268
BBP2
Legionella_OMP
OprF
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
ACA31267
LinkDB
All DBs
Position
complement(1738675..1739703)
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AA seq
342 aa
AA seq
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MKKTIIALSIAGFVASVQAAPQANTFYAGAKAGWASFHDGLNQFENSTEKKGTVRNSVAY
GIFGGYQITDHVAVELGSEYFGQAKGRKDKKEAKHTAQGMQLGLKASYPVLEGLDIYGRV
GAALIRSNYLNVKNFENSADGVKNTLKVSPVFAAGVEYSLPSLPELALRLEYQWVKGVGK
ARKNDGKRFDYTPSIGAVTLGLSYRFGQKPVMAPEVVNKVFSLNSDVNFAFAKDTLKPEA
QQTLDGVYGEIAQLKTAQVSVAGYTDRIGSDASNLKLSQRRADTVANYLVSKGVAQDAIS
AVGYGEANPVTGMKCDSVKGRKALIACLAEDRRVEISVKGSK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaattattgcattatctatcgcaggttttgtcgcttctgtacaagcggca
cctcaagcaaatacgttctatgccggtgcgaaagccggttgggcatctttccatgacggt
cttaatcaatttgaaaattctacagaaaagaaaggaacagttcgtaattcagtagcttat
ggtatttttggtggttaccaaattaccgatcatgttgctgtagagttgggttctgagtat
ttcggtcaagcgaaaggccgtaaagataaaaaagaagctaaacataccgctcaagggatg
caattaggcttaaaagcaagctaccctgtattagaaggcttggatatttacggtcgtgta
ggtgcggcgttaattcgttctaattatcttaatgttaaaaatttcgaaaattcagcagac
ggtgtgaaaaacactttaaaagtttctccggttttcgcagcgggtgttgaatacagccta
ccttctttaccggaattggcattacgtttggaatatcaatgggttaaaggcgttggtaaa
gcacgtaagaatgatggtaaacgtttcgactatacaccaagtatcggtgcggtaacactt
ggcttatcttaccgtttcggtcaaaaaccggttatggcacctgaagtagtaaacaaagtg
ttcagcttaaattcagatgtgaattttgccttcgctaaagatacattaaaacctgaagct
caacaaacattggacggtgtttatggtgaaatcgcacaattaaaaaccgcacaagtttct
gtggctggttatacagaccgtatcggttctgatgcgtcaaacttaaaattatcacaacgt
cgtgcggatactgtagcaaattatttagtctctaaaggtgttgctcaagatgccattagt
gcggtaggttacggtgaagcaaatccggtgactggtatgaaatgtgattcggttaaaggc
cgtaaagcactgatcgcctgtttagcagaagatcgtcgtgttgaaatctcagtgaaaggt
agcaaataa
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