Histophilus somni 2336: HSM_1774
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Entry
HSM_1774 CDS
T00673
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm03420
Nucleotide excision repair
hsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HSM_1774
03430 Mismatch repair
HSM_1774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsm03400
]
HSM_1774
Enzymes [BR:
hsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HSM_1774
DNA repair and recombination proteins [BR:
hsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HSM_1774
MMR (mismatch excision repair)
Other MMR factors
HSM_1774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACA31556
LinkDB
All DBs
Position
complement(2016122..2018302)
Genome browser
AA seq
726 aa
AA seq
DB search
MDISELLNDLNEKQRNAVVAPLGNYLVLAGAGSGKTRVLTYRIAWLSAVEKIPESSIMAV
TFTNKAATEMRHRIEATLARYSHQRLFGMWIGTFHSIANRLLRSHYADAGLPQDFQILDS
EDQLRLVKRLMKLHQYDEKAFPYKQACWYINNKKEEGLRPHQIEDNNDRQEREWIKIYKI
YQDACDRSGLVDFAELLLRAYELWLKNPHILQYYQQRFQHVLIDEFQDTNKIQYAWIKLL
AGSQGNVMIVGDDDQSIYGWRGAQIENIHRFLKDFAKVKIIRLEQNYRSTGNILESANRL
ISNNSNRLGKDLWTAGEKGDPVGIYAAFNELDEALFVSGQVQNWLDNGGKVDDCAVLYRS
NSQSRVIEEAFLRAKIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPR
GIGERTLDILRNLTRERQVTLWQATQLAIQENLIPIRSVTVLLRFIELINSLQQETAEMP
LFVQTDFVIKHSGLYDMYKQEKGDKGEVRIENLEELVTATREFIKPDEAEDMSDLVAFLT
HTSLEAGEEQAASHQPCVQMMTLHSAKGLEFPRVFIVGMEEGLFPSFRSGEDLARLEEER
RLAYVGITRAKQKLTLCYAEVRRLYGKDEKHIPSRFIAELPQECIQEVRLRGTVTRAYNR
SAVGSIVKTDLSDNSWKVGQKVKHEKFGQGTVINVEGADNNTRLQIAFQGQGIKWLIAHL
AKLEKI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagaattacttaatgatcttaatgaaaaacaacgcaatgctgttgttgca
cctttggggaattatctcgtacttgctggtgctggaagcggaaaaactcgagtattaacg
tatcgtattgcttggttaagtgcggtagaaaaaatacctgaatcaagtattatggcggta
acttttaccaataaagcagcgacggaaatgcgtcatcgtattgaggcaacgttagctcgt
tattcccatcaacgtttattcggtatgtggattggcacttttcacagtattgccaatcgc
ttattgcgatcccattacgcagatgccggattgccacaggattttcaaattttagacagt
gaagatcaacttcgcttagttaagcgtttgatgaaattgcatcaatatgatgaaaaagcc
tttccctataaacaagcttgttggtatatcaataataaaaaagaagaaggattacgccct
catcagattgaagataataatgatcgtcaagagcgagagtggatcaagatctataaaatt
tatcaagatgcttgtgatcgatcaggtctagtagattttgctgaattattattgagagct
tatgaattgtggctaaaaaatccacatattttgcaatattatcaacagcgttttcagcac
gttttgatcgatgaatttcaggatactaataaaattcaatatgcttggattaaattatta
gccggttcgcagggcaatgtaatgattgtcggagatgatgaccaatctatctatggttgg
cgtggtgctcaaattgagaatattcatcgctttcttaaagattttgcaaaagtgaaaatt
attcgtttagaacaaaattatcgttcaaccggcaacattttagaaagtgcaaaccgttta
atttccaataatagtaatcggttaggtaaggatctttggactgcgggtgaaaaaggagat
cctgtggggatttatgcggcttttaacgagttggatgaggctttgtttgtctccggtcag
gtacaaaattggctggataacggcggtaaggttgatgattgtgcagttttatatcgtagc
aatagccaatctcgtgtgatagaagaggcatttctcagggctaaaattccttatcgcatt
tatggcggtatgcgattttttgaacgacaagagattaaagatgctttagcgtatttgcgt
ttaattgccaatcgacaagatgatgcggcttttgaacgtgttgtaaatacgccaccacga
ggtattggtgagcgtactttagatattttgcgtaatttaactcgtgaaagacaagtgact
ttatggcaagcaactcagcttgctattcaagaaaatttaattcctatccgttcggtaact
gttttgttacgttttattgaattaatcaattccttacaacaagaaaccgcagaaatgccc
ctatttgtacaaactgattttgtgattaaacattccggtttatatgacatgtataaacag
gaaaagggggacaaaggggaagtgcgaattgaaaatttggaggagttggttaccgcaacg
agagaatttataaaaccggatgaggctgaagatatgtctgatttagtggcgtttttaaca
catacctctttggaagcaggagaagaacaagcagcctctcaccagccttgtgtgcaaatg
atgacattgcattcagcgaaaggcttagaatttccaagagtatttattgttggtatggaa
gaggggcttttcccaagttttcgttcgggtgaagacttggcacgtttggaggaggaacgc
cgtttagcttatgtagggattactcgagcaaaacagaaattgacattgtgttatgcggaa
gttcgccgcttgtatggtaaagacgaaaaacatattccttctcgttttattgctgaatta
ccgcaagaatgtattcaagaagttcgtttacgtggcacagtgactcgagcttataaccga
agtgcagtgggttctatcgtcaaaactgatttatcggataatagttggaaagttggacaa
aaggtgaaacatgaaaaatttggtcagggaacagtgattaatgttgagggggctgataat
aatacccgattacaaatcgcttttcagggacaaggtattaaatggctaatcgcgcattta
gccaaattggaaaaaatttag
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