Histophilus somni 2336: HSM_1922
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Entry
HSM_1922 CDS
T00673
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsm03000
]
HSM_1922
Transcription factors [BR:
hsm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HSM_1922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
UFL1
Motif
Other DBs
NCBI-ProteinID:
ACA31713
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Position
2177378..2178238
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AA seq
286 aa
AA seq
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MYKNLSLLLLDDLFDLELVAGLTQCEKGNYLDSMVDRQQGMSGYMLQLTTFGTGIIFDGK
HSFSTHRGQLLLFTPSAVQHYHRHPESQYWHYKWIYFLPNPKWNKWLNWSNMEEKIGRIT
IGDDRYFQEISQLFSKIEVELKSSKFFKEDVATSLLEYLLMKSISAEKIEVIPVIDQRIL
NVCDLILTNLAKNDSLEALAKKVFLSPSRLSHLFKQSLGIGLVQWREVQRISEAKKLLYF
SNISISNIAKSLGYEDSLYFSKIFKKHTALSPSKFRTLERCKNNEM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaatctatccttacttttacttgatgatttgttcgatttagaattagttgcg
ggtcttactcaatgtgagaaaggtaattaccttgattctatggtagatagacaacaagga
atgagtggctatatgttacaattaactacttttggtacaggcattatttttgatggtaaa
cattctttttccactcatcgaggacaattgctactattcacaccaagtgcggttcaacat
tatcacagacatccagaaagtcagtattggcactataaatggatctattttttaccaaac
ccaaaatggaataaatggttaaattggtcaaatatggaggaaaaaatagggcgtattacc
attggtgatgaccgctactttcaggaaatcagtcagcttttcagcaaaattgaagtcgaa
ttgaaatcaagtaaattttttaaagaagatgtagccaccagtctattagaatacttactt
atgaaaagtatttccgccgagaaaattgaagttattccagtaattgatcagcgtatttta
aatgtttgtgatttaattttgaccaatttggctaaaaatgacagcttagaagcactagca
aaaaaagtatttttatcgccatcaagattatctcacctttttaaacaatctttgggtatt
ggcttagtgcaatggagagaagtacagcgtatttccgaagctaaaaaattactttatttc
tctaacatttctatctcaaatattgctaaatctttaggctatgaagattctctctacttt
tcgaaaattttcaaaaaacacaccgcactgtctccgtctaaatttagaactttagaaaga
tgtaaaaacaatgaaatgtga
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