Histophilus somni 2336: HSM_1985
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Entry
HSM_1985 CDS
T00673
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsm03009
]
HSM_1985
Enzymes [BR:
hsm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HSM_1985
Ribosome biogenesis [BR:
hsm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HSM_1985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
Methyltransf_25
RrnaAD
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_11
TRM5-TYW2_MTfase
DOT1
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ACA31782
LinkDB
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Position
2231055..2232374
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AA seq
439 aa
AA seq
DB search
MVLLYQPKKQKKLRAAFTTIVQDLDYQGLGVAKIQGKTWFIENALPQEQVQVQVIEEKRQ
YGLGRVQKILQASPLRQTPRCAYYQICGGCQSQHIPIHLQRETKQKALFQRLTKLQKEAI
EFMPMISGEAWHYRRRVRLSLYWDAKSKKLKIGFRQKNSQQIVNIRQCDVLDPLLNELLP
KLHELLSTCSKPKTLGHIELVAADNGVAMLLRVTEKLAEHDRTLLLDFAFNHQVMLFVQD
EKEICHLQGDLPYYQLDDGSILHFDIRDFIQVNRQLNQNMVNTALDWLDLKKKDNVLDLF
CGMGNFTLPISRYVKSAVGIEGVLPMVEKARRNGERNHCHNVQFYQCDLSQSFTEQEWAK
VPFDKILLDPPRSGAAFALNALCYLMAEKIVYVSCNPATLVRDVELLLKFGYQLKKVAMI
DMFPHTSHLESISLFERNR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggttttactttatcagccaaagaaacaaaaaaaattgagagcagcttttacgaccatt
gttcaagatttggattatcaaggattaggtgtagcaaaaattcaaggaaaaacgtggttt
attgagaacgcattaccacaagagcaagtacaggttcaagttattgaagaaaaacgtcaa
tatggactgggtcgagttcaaaagattttacaagccagccctttgcgacaaactccaaga
tgtgcttattatcaaatttgtggcggctgtcaatctcagcatatccctatacatttacaa
cgtgaaacgaaacaaaaagcgttatttcagcgtttaaccaaactgcaaaaagaggctata
gaatttatgccgatgataagtggcgaagcatggcattatcgccgtagagtacgcttaagt
ttgtactgggacgctaaaagtaaaaaattgaagataggctttcggcaaaaaaattcacaa
caaatcgtgaatattcgtcaatgcgatgtgcttgatcccttgttaaatgagttattacct
aaattgcatgagttgttgagtacgtgctctaaaccgaaaacactaggacatattgaatta
gttgccgcagataatggcgtagcgatgttattgagagtaacagaaaaattggctgaacat
gaccgcactttattgttggattttgcatttaatcatcaagtgatgttatttgtacaagat
gaaaaagagatttgtcatttgcaaggagatttgccttattaccaattagatgatggttct
attttacattttgatattcgtgattttattcaggttaatcgccaacttaaccaaaacatg
gtcaatactgcactggattggttggatttgaagaagaaggataatgtgttggatttattt
tgtggtatgggaaattttaccttgccgattagccgatatgtgaaaagtgcggtaggaatt
gagggtgttttacctatggtcgaaaaagcccgtcgtaatggggaacgaaatcattgtcat
aatgtccaattctaccagtgcgatttaagtcaatcttttactgagcaagaatgggcaaag
gttccttttgacaaaatcttactggatccaccgagaagcggtgccgcatttgctttaaat
gcattgtgttatttaatggctgaaaaaatagtgtatgtgtcttgtaatccggcgacatta
gtgcgtgatgtggagcttttgcttaagtttggttatcaattaaaaaaagttgcaatgatt
gatatgttcccacatacaagtcatctggaaagtattagcttatttgaaaggaacagatag
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