Halapricum salinum: DV733_03295
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Entry
DV733_03295 CDS
T05943
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
hsn
Halapricum salinum
Pathway
hsn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DV733_03295 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsn03019
]
DV733_03295 (prf1)
03012 Translation factors [BR:
hsn03012
]
DV733_03295 (prf1)
Messenger RNA biogenesis [BR:
hsn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DV733_03295 (prf1)
Translation factors [BR:
hsn03012
]
Eukaryotic type
Release factors
DV733_03295 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
ZnF_RZ-type
Motif
Other DBs
NCBI-ProteinID:
QCC50319
UniProt:
A0A4D6H8Y3
LinkDB
All DBs
Position
complement(670962..672215)
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AA seq
417 aa
AA seq
DB search
MSEQDAEQSDRQKYEFQKVIEELQDYRGSGTQLVTIYIPEDKQISDVVAHVTQEHSEASN
IKSKETRTNVQDALKSIKDRLRYFDVYPPDNGVVLFSGAVDAGGGQTDMITRVLESPPDP
IESFRYHCDAEFLTEPLEDMLLDKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVEQRHDLDGILVGGPSPTKDEFLDGD
YLHHELQDMVLGKFDVSYTDESGLYDLVDAASEVLAEHEILQDKEVMEEFFKQLHDGDKA
TYGFDQTRQNLNMGAVEELLLSEDLRKDAVTYECPNGHTDYELINRNADTEAHDCSTCGE
TVSAESAEREDAIEHLMELAEQRGTETVFISTDFEKGEQLLTAFGGVAGILRYSTGV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaggacgccgagcaatctgatcggcaaaaatacgagttccagaaggtgatc
gaggaactccaggactaccgcggctctggaacccaactggtcaccatctacatccccgag
gacaaacagatcagcgacgtcgtcgcccacgtcacccaggagcacagcgaggcgtcgaac
atcaagtccaaggagacccgcacgaacgttcaggacgccctgaagtcgatcaaggaccga
ctccggtacttcgacgtctatccgccagataacggggtcgtcctcttttcgggcgctgtc
gacgccggcggcggccagacggacatgatcacgcgcgtcctcgaaagcccgcccgacccc
atcgaatcgttccgctatcactgcgacgcggagttcctgaccgagcccctcgaggacatg
ctgctggacaagggcctctttgggctcatcgtgctggaccgccgggaggcaaacgtcggc
tggctcaagggcaagcgcgtcgagcccgtcaagtccgcctcctcgctggtcccgggcaaa
cagcgcaaagggggtcagtccgcccagcgattcgcccggctccgactggaagcgatcgac
aacttctatcaggaggtcgcggggatggccaacgatctgttcgtcgagcagcgccacgat
ctcgatggaatcctcgtcggtggtccctcgcccacgaaagacgagttcctcgacggcgac
tatctccatcacgaactgcaagacatggtgctggggaagttcgacgtctcttataccgac
gagtccggcctgtacgatctggtcgatgccgcaagcgaggtcctggccgaacacgagatc
ctccaggacaaggaggtcatggaggagttcttcaagcaactacacgacggcgacaaggcg
acctacgggttcgaccagacgcgccagaacctcaacatgggtgcggtcgaagaactcctt
ctcagcgaagacttgcggaaggatgccgtcacttacgagtgtcccaacggccacaccgac
tacgaactgataaaccggaacgcagacaccgaggcccacgattgttcgacctgcggcgag
accgtctcggccgaatcggccgaacgcgaggacgcgatcgagcacctgatggaactggcc
gaacagcgcggcacggagacggtgttcatctcgacggacttcgagaagggcgagcagcta
ctgacggcgttcggtggcgtcgcgggcattctgcggtactcgactggcgtgtaa
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