Halapricum salinum: DV733_04240
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Entry
DV733_04240 CDS
T05943
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hsn
Halapricum salinum
Pathway
hsn03030
DNA replication
hsn03420
Nucleotide excision repair
hsn03430
Mismatch repair
hsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DV733_04240
03420 Nucleotide excision repair
DV733_04240
03430 Mismatch repair
DV733_04240
03440 Homologous recombination
DV733_04240
03460 Fanconi anemia pathway
DV733_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsn03000
]
DV733_04240
03032 DNA replication proteins [BR:
hsn03032
]
DV733_04240
03400 DNA repair and recombination proteins [BR:
hsn03400
]
DV733_04240
Transcription factors [BR:
hsn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DV733_04240
DNA replication proteins [BR:
hsn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
DV733_04240
DNA repair and recombination proteins [BR:
hsn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
DV733_04240
MMR (mismatch excision repair)
DV733_04240
DSBR (double strand breaks repair)
HR (homologous recombination)
DV733_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
QCC50497
UniProt:
A0A4D6HCQ1
LinkDB
All DBs
Position
complement(858386..859816)
Genome browser
AA seq
476 aa
AA seq
DB search
MGAIEDVYEDLDADVSEEDFREAVEQKVEQMGGLADEETAAMLIAHELSENEVNSIADIE
SGMEEVKFLAKVTSIGDLRTFERDGEDDDGMVINVEAADETGSVRLAFWDEQAGSIDEGS
LEVGQVLRIKGRPKDGYNGLEVSVDKAEPDDDAEIDVEIGGTSSIDSLSMGQSDVDARGI
VLGTESIRTFDRDDGSEGRVSNLSLGDETGRIRVTLWDEQADRAEELDTGTAVEVVDGYV
RERDGSLELHVGDRGAVEEIDDEIDFSPETDPIDSVEIETTVDIGGVVRSVDPKRTFDRD
DGSEGQVRNIRVQDDTGDIRVALWGEKADTDLGPGDEVFVADAEIQDGWQDDLEASAGWG
ATVVVLDDGATAGSSSGGGGDQSAGLDAFAEGGGGASSDSASESGTEASSSSDDAVAETV
EKVEITGTVVQTGDPVIVDDGEETINVETDASVQLGQQVTLRGHRQGDRLEADEIL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgatcgaggacgtctacgaggatctcgacgccgacgtctccgaggaggacttc
agggaggccgtcgagcagaaagtcgaacagatggggggcctcgccgacgaggagacggcg
gcgatgctcatcgcgcacgaactgagcgagaacgaggtcaattcgatcgccgacatcgag
agcggcatggaggaagtcaaattcctcgcgaaggtcacgtcgatcggtgacctccggacc
ttcgaacgcgacggcgaggacgacgacgggatggtcatcaacgtcgaggccgccgacgag
accgggtcggtccggcttgccttctgggacgaacaggccggctcgatcgacgagggcagt
ctcgaagtcgggcaagtcctgcggatcaagggtcgcccgaaagacggctacaacggcctg
gaagtcagcgtcgacaaggccgaacccgacgatgacgccgaaatcgacgtcgagatcggc
gggacgagttcgatcgactcgctttcgatgggccaatcggacgtcgacgcccgcgggatc
gtcctcgggaccgaatcgatccgaaccttcgaccgtgacgacggctcggaagggcgggtc
tcgaacctctcgctgggcgacgagaccggacgaattcgcgtgacgctgtgggacgagcag
gccgaccgcgccgaggaactcgacaccggcacggcggtcgaggtcgtcgacggctacgtc
cgcgagcgcgacggctccctcgaactgcacgtcggcgaccgcggcgcagtcgaggagatc
gacgacgagatcgacttcagccccgagactgacccgatcgacagcgtcgagatcgagacg
actgtcgacatcggtggcgtcgtccgttcagtcgacccgaaacggacgttcgaccgcgac
gacgggagcgagggccaggttcgaaatatccgcgtgcaggacgacaccggcgacatccgc
gtggcgctgtggggtgagaaggccgacaccgacctcgggccgggcgacgaggtgttcgtc
gccgacgccgagattcaagacggctggcaggacgatctggaagcctccgctggctggggt
gcgacggtcgtcgtgctcgacgacggcgcgacagccggatcgagcagcggcggcggtggg
gaccagagcgccggactggacgcgttcgccgagggcggcggtggagcgagtagcgactcc
gcgtccgagagtggaaccgaggcgtcttcgtccagcgacgacgcggtcgctgagaccgtc
gaaaaagtcgagattacggggacggtcgtccagacgggcgatccggtgatcgtcgacgac
ggcgaggagaccatcaacgtcgagacagacgcgagtgtccagctgggtcagcaggtcacg
ctccggggtcaccgccagggtgaccgactggaggccgacgagatcctctga
DBGET
integrated database retrieval system
