Halapricum salinum: DV733_07660
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Entry
DV733_07660 CDS
T05943
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
hsn
Halapricum salinum
Pathway
hsn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV733_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsn03021
]
DV733_07660
Transcription machinery [BR:
hsn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DV733_07660
Prokaryotic type
Archaeal type
TFB
DV733_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_Ribbon_YjdM
Trm112p
Zn_ribbon_tTFIIB
Lar_restr_allev
Zn_ribbon_8
Zn_ribbon_Elf1
Zn_ribbon_PaaD
Zn_ribbon_LysW
Sigma70_r4
Zn_ribbon_IS1595
Cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QCC51122
UniProt:
A0A4D6HDH5
LinkDB
All DBs
Position
1511232..1512200
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AA seq
322 aa
AA seq
DB search
MTRSTRQRERERESQTETDQEEDEIHDCPECGSDNLVKDADRGELICDDCGLVVEEGNID
PGPEWRAFNHQERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLR
KWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDDDLIRGRSIEG
VATAALYAACRKEGIPRSLEEISDVSRVERKEIGRTYRYISQELGLEMEPVDPKKYVPRF
CSELQLSEEVQTKANEIIEETAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVA
QVTEVTIRNRYQEQIEAMGIHG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgccagcgggagcgcgagcgtgagtctcagacggaaaccgatcag
gaggaggacgaaatacacgattgcccagagtgtggttccgacaatctcgtaaaggacgcc
gaccgtggcgaactcatctgtgacgactgtggtctggtcgtcgaggaaggcaacatcgat
cccggaccggagtggcgcgcgttcaaccatcaggaacgccagcagaagtcccgcgtgggt
gcacccaccacgcagacgatgcacgacaaggggctgaccacgacgatcgactggaaggac
aaggacgcctacggacgttcgatctcctcgaaaaagcgcagtcagatgcaccgtctgcgc
aagtggcaagagcgaatccggaccaaggacgcgggcgagcgcaacctccagttcgccctc
agcgagatcgatcgcatggcctcggcgctcggggtgccacgctcggtccgggaggtcgcg
tcggtgatctatcggcgggcgctcgacgacgacctcattcgcgggcgttccatcgagggt
gtggctacggccgcgctctacgccgcctgtcgaaaagaggggattccgcgcagtctcgaa
gagatctcggacgtctcccgggtcgagcgcaaggagatcggccgtacgtaccggtatatc
tctcaggaactcggcctggagatggagccggtcgatcccaaaaagtacgtcccgcggttc
tgttctgaactccagctctccgaggaagtccagaccaaggccaacgagatcatcgaagag
acggccgagcagggcctgctctccggtaaatcgccgactggctatgcggctgccgcgatc
tacgccgcctcgttgctctgcaacgagaagaagacccagcgggaagtcgccgacgtcgcg
caggtgactgaggtcactattcggaaccggtatcaggagcagatcgaggcgatgggcatc
cacggctag
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