Halapricum salinum: DV733_08855
Help
Entry
DV733_08855 CDS
T05943
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hsn
Halapricum salinum
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsn03016
]
DV733_08855 (endA)
Enzymes [BR:
hsn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DV733_08855 (endA)
Transfer RNA biogenesis [BR:
hsn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DV733_08855 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QCC51345
UniProt:
A0A4D6HCM4
LinkDB
All DBs
Position
1735317..1736345
Genome browser
AA seq
342 aa
AA seq
DB search
MKLTLAGGVVRGGRQARERFYDARGYGRVVSGDLELAPVEAAHILSRGDVETIRDADSGE
RLDFRGLLTSDAVSEIDVLVYKDLRDRGFYLSPAREGWVADPAGADFLVYPRGNGPWDDE
IAYRVRAISEREDVPARELGDTVLAVVDEESSITYLESDRPEIEGSTAFDLPEGVAADLL
GDRVLVWEPPAELYEQAFYGQPLDEESGTPLQVSLVEAAALARRGILDVDGGEQAVIERG
REVEGDRFDRRLAVYRALRDRNVVPKTGFKFGADFRTYADVEDVENLGHSELLVRVLPAD
HTFSPRDLALDVRLAHGVRKRMVFALVAEGDIEWLSVSRLTP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacactggcgggtggggtcgttcgcgggggtcgccaggcccgcgagcgtttc
tacgacgcgcgcgggtacggtcgagttgtctctggcgatctcgaactcgcgccggtcgag
gctgcacacatcctctcccggggtgacgtcgagacgattcgtgacgccgactcgggtgag
cgcctggactttcgcggcctgctcacgtccgacgccgtctcggagatcgatgtcctcgtc
tacaaggacctccgagatcgcgggttctacctctcgcccgcccgcgagggatgggtcgcc
gatcccgcaggtgcggactttctcgtctatccccgcgggaacggcccctgggacgacgag
atcgcctaccgagtccgcgcgatcagcgagcgcgaggacgtcccggcgcgagaactcggc
gacacagtcctcgcagtcgtcgacgaggagtcctcgatcacctatctcgaaagcgaccgt
cccgagatcgaggggtcgacagcgttcgacctgcccgagggcgtcgcggccgaccttctc
ggggatcgcgtgctcgtctgggagccgccagcagagttgtacgagcaggcgttctacggc
cagccgctggacgaagagagtgggacgccacttcaggtgtcgctggtcgaggcagccgcg
ctggcccgccgtggcattctcgacgtcgacggtggcgaacaggccgtcatcgagcgcggc
cgcgaagtagagggggatcggttcgaccgtcgactcgccgtctatcgtgcgcttcgcgac
cggaacgtggtgcccaagaccgggttcaaatttggtgcggacttccggacctacgccgac
gtcgaagacgtcgagaacctgggccactcggagttgctcgtgcgcgtgttacccgcagat
cacacgttctcgccgcgtgatctggcactcgacgtccgactcgcccacggcgtccgcaag
cggatggtcttcgcgctggtcgccgagggcgacatcgagtggctctcggtctcgcggttg
acgccgtga
DBGET
integrated database retrieval system
