Halapricum salinum: DV733_09580
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Entry
DV733_09580 CDS
T05943
Name
(GenBank) HTH domain-containing protein
KO
K03124
transcription initiation factor TFIIB
Organism
hsn
Halapricum salinum
Pathway
hsn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV733_09580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsn03021
]
DV733_09580
Transcription machinery [BR:
hsn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DV733_09580
Prokaryotic type
Archaeal type
TFB
DV733_09580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_11
Cyclin_C
HTH_Mga
HTH_Tnp_ISL3
HTH_AsnC-type
Zn_ribbon_RRN7
Cas12f1-like_TNB
Sigma70_r4_2
HTH_24
zf-FPG_IleRS
A2L_zn_ribbon
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QCC51474
UniProt:
A0A4D6HBK9
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All DBs
Position
1906594..1907571
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AA seq
325 aa
AA seq
DB search
MSETNTRFRTHDRSRTAPTEPVAEETDELTCPECGADGVTVEKRGETVCEACGVVIEDDM
IDHGPEWRAFDSRERDQKSRVGAPSTNTLHDKGLSTKIDWQDSDAKGSALSARKRSQMVR
LRTWDERFRAQSARERNLKQALGEIDRMASALGLPENVRETASVIYRKALYDDLLPGRSI
EAMATGSLYAAARQANTPRSLDEFQPISRVDRQEYARAYRYLARELGLAVEPADPASYLP
RFASALDVPEEVERRARELLNVSKPKGVHSGKSPVGLAAGALYAAALLTNEQITQQTIAE
ETEVSEVTIRNRYQELLEAYDQDAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccaacacgcggttcagaacccacgatcgcagccgaacagcaccgaccgag
ccagtcgcggaagagaccgacgagctcacgtgccccgagtgcggtgcggacggcgtcacc
gtcgagaagcggggtgagaccgtctgtgaggcctgtggcgtcgtcatcgaagacgacatg
atcgatcacgggccggagtggcgggcgttcgactcccgtgagcgcgaccagaagtcccgc
gtgggtgcgccctcgacgaacaccctccacgacaaagggctctcgacgaagatcgactgg
caggacagcgacgccaaagggtcggcgctctcggcacggaaacgctcccagatggtccgc
ctgcggacctgggacgagcgcttccgtgcccagagtgcccgcgagcgcaacctcaagcag
gcactcggcgagatcgatcggatggcctctgccctggggctgcccgagaacgtacgcgag
actgccagcgtcatctaccgcaaagcgctgtacgacgacctgcttcctgggcgctcgatc
gaggcgatggcgacggggtcgctgtacgccgccgcccggcaggccaacaccccgcggagc
ctcgacgagttccagcccatctcccgggtcgaccgccaggagtacgcccgtgcctaccgc
tatctcgcccgggagctcggcctcgctgtcgagccggccgaccccgcgtcgtacctgccg
cggttcgcctccgcactcgacgttcctgaagaggtcgaacgccgcgctcgcgaactgctg
aacgtttccaagcccaagggcgtccactccggaaagtcgcccgtcgggctcgcggccggc
gcgctgtacgccgccgcgttgctcaccaacgaacagatcacccagcagaccatcgccgag
gagaccgaggtcagcgaggtgacgatcagaaaccgctaccaggaactgctggaagcctac
gaccaggacgcagcctga
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