Halapricum salinum: DV733_11635
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Entry
DV733_11635 CDS
T05943
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hsn
Halapricum salinum
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsn03000
]
DV733_11635
Transcription factors [BR:
hsn03000
]
Prokaryotic type
Helix-turn-helix
Other families
DV733_11635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
BAT
GAF_2
PAS_3
HTH_10
PAS
GAF
GAF_3
PAS_8
PAS_10
Response_reg
PAS_11
SbcD_C
DUF4585
Motif
Other DBs
NCBI-ProteinID:
QCC51845
UniProt:
A0A4D6HE32
LinkDB
All DBs
Position
2366786..2370433
Genome browser
AA seq
1215 aa
AA seq
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METVLSPLQIVYIRGTETSAENVRCALESADPAVDLTVVDSGTDTGSLLDERSIDCVLSE
YPAESGTEIIERLREAYPDLPVVFVLTDERATVADDAVAAGATEYVRQSALRDRPEIFRR
RIRAAVEHARRAATGSSRPTAATPDEITFEGALREHVAEAVVGNFPNGAVTLVGTDLRYR
LAGGQLFEKLPSDPDDVIDTHVGDLESGDRDVFVQSYRDALDGTETATETLVEGVTLLHR
TVPVYDADGSVVAAVGMTQDITDRKEHERELERNREFLDSVQSVANIGGWEVDLRSETLR
WTDEVYRIHEIPSEYDPILAEGMEFYHPDDRETIEQAYEELVSTGESFDMELRIVTANDT
VRWVRTRGEPWTDDEGKVVGARGTFQDITERREHEQELQRKSRAIEAAPIGITMTDPEQD
DNPLIYANQQFLETSGYDREEVLGRNCRFMQGEETDPETVARIREGIDAEEPVAVGIKNY
RKDGTTFWNHLEIAPVHDDHGELINYVGFQKDITERVEYERELEKSRSRYRTLVEHFPNG
AVALVDEELRYITVGGTPIDAAWDAETELTGQPLAEVLTDEMAAELRPRYADALEGDQCS
FETEVGDRCYQFRIVPVRADDGSVFAAMGVSQDITEQKERERSLQKRERVLRELHAASRE
FYPPDSMADISPFVVDFLQHAFDFSYVSVKRFDEGEGVLQPVATSALPEQGIEQLGPVEP
GDNPLWNAYRDGESVQFSGELLLELFDADGTVGDHCLAVPIGNFGLIVVVTAGDRSFDGA
DRDLLEVLATNAEAIFQSLQHDRERETLAERVETQQQTLEELRGVIDAVQAIQARVANSE
TRDELETGVCTELVETDSIDFAWIGRPKGSDTDLDPTAWTGERPDYLDSVLQTTGAATLP
AEHAAARREPYAVDSIPKRVMDEQWAKEALSRNFRSALSVPLIYDDVLYGVLTVYSSREA
AFEEQYRNLVTDVGSLLVTYSRVLQQRYASDQAFVELEFELDDPTYPLQRLARETGSRIE
YDTVTETVDGGVRTLVTVTEGDPQSVLALADSTPSIAGASQFGDDTSRQLRLTIAEPFLA
SEVGKHGGRLLEAASTETGTRLRIALPESVSSRPLFDTLTTQYREIDLLAQRQRVYETEP
AAEALTDRQYEILNAAYHSGYYDVPRNVTGEALAAEFDISGPALYKHLQAAHSKVFEQYL
RPETSSMVDNGGLDA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggtactgtcgcctctccaaatagtttatataaggggaactgagacgtcggcg
gagaacgtccggtgcgctctcgaatccgcagatccggccgtcgatctcaccgtcgtcgat
agcggtacggacacgggctctctgctcgacgagcgttcgatcgactgtgttctctcggag
tacccggcagagagcggtacggagatcatcgaacggctccgagaggcatatcccgatctc
ccggtcgtattcgtgctcaccgacgagcgggcgacggtcgccgacgacgccgtcgcggcg
ggcgcgaccgagtacgtccggcaatcggcactccgcgatcgccccgagatcttccgcagg
cggattcgcgcggccgtcgagcacgccaggagggcagcgaccggatcatcgaggcccact
gcagccacgcccgacgagatcacgttcgagggggcgttgcgagaacacgtcgccgaagcg
gtcgtcggaaacttcccgaacggtgcggtgacgctggtcggtactgatctccggtatcga
ctggccggtgggcagttgttcgagaaactaccgagcgatcctgacgacgtgatcgatacg
cacgtcggcgacctcgaatccggggatcgggacgtgttcgtccagtcctacagggacgcg
ctcgatggcactgaaacggccaccgaaacccttgtcgagggagttactctcctgcaccga
accgttccagtgtacgacgccgatgggtctgtcgtcgccgcagtcgggatgacacaggat
atcaccgaccggaaagaacacgagcgagagctcgagcgtaatcgagagttcctcgacagc
gttcagtcggtcgcgaacatcggtggctgggaagtcgatctccggtcggagacgctgcgc
tggacggacgaggtgtaccggatccacgagataccgagcgagtacgacccgatcctagcg
gaggggatggagttctaccatcccgacgaccgtgagacgattgaacaggcctacgaggag
ctggtttcgaccggggagtctttcgacatggaactgcgcatcgtgacggccaacgacacc
gtccggtgggtccgaacgcggggggaaccctggaccgacgacgaagggaaggtcgtcggc
gcgcgcgggacgttccaggacatcacagaacgaagagagcacgaacaggaactccagcga
aagagtcgagcgatcgaggcagcgccgatcggcatcacgatgacggacccggaacaagac
gacaatccgctcatctatgcgaaccagcagttcctcgagacgtcgggatacgatcgggag
gaagtgctcggtcggaactgtcggttcatgcagggcgaggagaccgacccggagacagtc
gccaggatcagggagggcatcgacgccgaagaacccgtggccgtcgggatcaagaactac
aggaaggacgggaccacgttctggaaccatctcgagatcgcaccggtccacgacgatcac
ggcgaactcatcaactacgtcggcttccagaaggacatcaccgaacgagtcgaatacgaa
cgggaactggagaagtcacgaagtcgatatcggaccctcgtcgagcacttcccgaacggg
gccgtcgccctcgtcgacgaggagcttcgctatatcaccgtcggtgggacaccgatcgac
gcagcctgggacgcggagacggaactcacgggccaaccgctcgcggaggtgctcaccgac
gagatggccgccgaactccgcccgcggtacgccgacgcactcgagggcgaccagtgttcg
ttcgaaacggaggtcggcgaccgatgctaccagttccgtatcgtcccggtacgcgccgac
gacgggtccgtgttcgccgcgatgggggtctctcaggacatcactgaacagaaagaacgc
gaacggtctctccagaaacgggagcgggtccttcgggagttacacgccgcgtcgagagag
ttctacccgccggattcgatggcagatatctcgccgttcgtcgtcgacttcctccagcat
gcgttcgatttcagctacgtcagcgtcaagcgcttcgacgagggagagggcgtcctgcaa
cccgtcgcgacgtctgcactgcccgagcagggaatagagcagctgggaccggtcgaaccc
ggtgacaatccgctctggaacgcgtatcgggacggcgagtcggtgcaatttagcggtgaa
ctcctgctcgaactgttcgacgcggacggcaccgtcggcgatcactgtctggccgttccg
atcgggaacttcggcctgatcgtcgtggtgacggccggggatcgatcgttcgacggtgcc
gatcgcgatctcctcgaggtgctcgcgaccaacgcagaggctatcttccagagtctccag
cacgaccgggaacgggagaccctcgccgagcgagtcgagacacagcagcagacgctcgag
gaattacggggggtcatcgacgcggtacaggcgattcaggctcgtgtcgctaacagcgag
acccgggacgaactcgagacgggcgtctgtacagagctggtcgagaccgacagcatcgac
ttcgcctggatcgggcgtccgaagggcagcgataccgatctcgacccgacggcgtggact
ggggagcgcccggactatctcgactcggtgctacagacgactggggcggccacactaccg
gccgagcatgccgcagcacggcgggagccctacgcagtcgacagcatcccgaaacgggtc
atggacgagcagtgggccaaagaagcgctctcccggaacttccgatcggcgctgagtgtc
ccgctcatctacgacgacgtgctgtacggtgtgttgacggtctactccagccgggaagcg
gccttcgaggagcagtaccggaatctcgtcaccgacgtcggatcgctgctggtgacctac
agtcgcgtcttgcagcagcgctacgcgtccgatcaggcgtttgtcgaactggagttcgaa
ctcgacgatccgacctatccgctgcagcgactcgccagagagactgggagccggatagag
tacgacacggtcactgaaaccgtcgacggaggggtcaggacgctcgtcaccgtcaccgag
ggcgacccgcagtcggtgctggcgttggcggactcgacccccagcatcgccggtgccagc
cagttcggcgatgacacgtcgcgacagctccgtctgaccatcgccgagccgttcctggcc
tcggaagtcgggaaacacggtggacgtcttctcgaggccgcctcgacggagacgggcact
cggttgcggatcgcgctcccggagagcgtctcctcgcgcccgctgttcgatacgctgacg
acacagtaccgggagatcgacctgctcgcacagcgccagagggtctacgaaaccgaaccg
gcggccgaggcgctcaccgaccgccagtacgaaatcctgaacgccgcgtaccacagtggc
tactacgacgtcccccgaaacgtgaccggcgaagcgctcgcggccgagttcgacatctcc
gggccggcactctacaaacacctccaggccgcacacagcaaagtgttcgaacagtacctc
cgcccagagacgagtagcatggttgataatggagggttagacgcttaa
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