Halapricum salinum: DV733_13980
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Entry
DV733_13980 CDS
T05943
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hsn
Halapricum salinum
Pathway
hsn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV733_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsn03021
]
DV733_13980
Transcription machinery [BR:
hsn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DV733_13980
Prokaryotic type
Archaeal type
TFB
DV733_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_tTFIIB
HTH_24
Trm112p
Sigma70_r4
Zn_ribbon_RRN7
Auto_anti-p27
DUF7972
TrmB
ABC_tran_Xtn
A2L_zn_ribbon
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QCC52273
UniProt:
A0A4D6HE99
LinkDB
All DBs
Position
complement(2836564..2837538)
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AA seq
324 aa
AA seq
DB search
MSETTIRTTDAETERLNARTDEAESERCPECSGALVTDSERGETVCTDCGLVVEEDEIDH
GPEWRAFDAREKDKKSRVGAPTTTMMHDKGLSTNIGWQNKDAYGRSLNASQRKKMQRLRT
WNERFRTQNSKERNLKQALGEIDRMASALGLPESVRETASVIYRRALKDDLLPGRSIEGV
ATAALYAAARQANYPRSLDEMERVSRVDRMELTRTYRYIIRELGLEVAPADPESFVPRFT
SDLGLSDEVERTARRLIDAARADGLLSGKSPVGIAAAAIYAAALLSNERVTQSEVSEVAD
ISEVTIRNRYKELLEADGVQNMSA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacaacgattcgaaccacagacgccgaaacggaacgactgaacgcccgaacg
gacgaagccgagagcgaacgctgccccgagtgcagcggagcgctcgtgaccgatagcgag
cgcggtgagacggtgtgtaccgactgtgggctggtcgtcgaggaagacgagatcgaccac
ggacccgagtggcgcgcgttcgacgcccgggagaaagacaagaagagccgcgtcggggcg
ccgacgacgacgatgatgcacgacaagggcctgtcgacgaacatcggctggcagaacaag
gacgcctacggccggagtctcaacgccagccagcgaaagaagatgcagcgtctgcgcacc
tggaacgagcgcttccgcacgcagaactccaaagagcgcaacctcaagcaggctctcggc
gagatcgaccgcatggcgagtgcgctcggcctccccgagagcgtccgcgagaccgcgagc
gtcatctatcgtcgcgcgctgaaagacgacctcctcccgggtcggtcgatcgagggtgtc
gcgaccgccgcgctgtacgccgcggcccgacaggccaactacccgcgcagcctcgacgag
atggaacgcgtctcgcgagtcgaccggatggaactcacccggacgtatcgctacatcatc
cgcgaactcggcctggaagtcgcgcccgccgaccccgagagcttcgtcccgcggttcacc
tccgacctcggcctctccgacgaggtcgaacgcacggcccgccggctgatcgacgccgcc
cgcgctgacggcctgctcagcggcaagagccccgtgggaatcgctgcggcagccatctac
gccgcggcgctgctcagtaacgagcgcgtcacccagagcgaggtcagcgaggtcgcagac
atctcggaagtgacgattcgcaaccgctacaaggaactgctggaggccgacggcgtccag
aacatgtccgcctga
DBGET
integrated database retrieval system
