Histophilus somni 129PT: HS_0039
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Entry
HS_0039 CDS
T00386
Symbol
rsmB
Name
(GenBank) 16S rRNA m(5)C-967 methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hso03009
]
HS_0039 (rsmB)
Enzymes [BR:
hso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HS_0039 (rsmB)
Ribosome biogenesis [BR:
hso03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HS_0039 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_25
Methyltransf_31
Methyltransf_5
Methyltransf_37
Methyltransf_11
Methyltransf_15
Methyltransf_12
adh_short
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ABI24320
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All DBs
Position
complement(41203..42591)
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AA seq
462 aa
AA seq
DB search
MSKSQHNKTKRAVKSTALFTPRSVRVLAAEVILQVLVQGKSLSTLLPEQQSAVKPQDFPL
LQEICFGICRVLPRLERIIQLLLDKPLKGKTRIVHCLLLVGLYQILYTRIPAHAAVDEVV
SATKSLKSDSFRGLLNAVLRRFLREQEQILAIVDKHWQTLHPEWLVNKLKQSYANWREIV
EANNQKPPMWLRINLQHCSIADYQQLLMERGISTSTTNHPQALRLHQASAVNLLPYFEQG
WVSVQDLHAQWSALLLEPENNELILDACAAPGGKTTHILEQAPNAKVIALDIEPARLQRV
KENLVRMKQQAIIICGDATQPEQWLSEIDFNAIGLTFKSESAVQFDRILLDAPCSATGVI
RRHPDIKWLRQESDITPLVQLQGQILEALWKKLKPQGILVYATCSLLPEENSQQIQHFLT
KHNDAKLEPLPFTIGEEIGHQFVPTEQGGDGFYYAKLRKLPN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatctcagcacaacaaaactaaaagagcggtcaaatctaccgcacttttcacg
cctcgctcagtccgtgtgcttgcggcagaagtaattttacaagttttagttcaaggtaaa
tccctttctaccttgctgcctgagcaacaaagtgcggtcaaacctcaagattttccgcta
ctacaagaaatttgttttggtatttgtcgtgtgttacctcgcttagaacgcatcattcaa
ctcctactggataagcctttgaaaggtaaaactcggatcgtgcactgcttgttgttggtc
ggtttataccaaattttatatacccgaattcctgctcatgctgcagtggacgaagtcgtt
tctgccacgaaaagtttaaaatcagatagtttccgtggcctgttaaatgctgttttgcgt
cgctttttgcgggaacaagaacaaattctggcgatagtggataagcattggcaaacctta
catccagaatggttagtgaataaactaaaacaatcttatgccaattggcgtgaaattgtt
gaagcgaataaccaaaaacctccgatgtggctacgcattaatttacaacattgttctatt
gcggattatcaacaacttttaatggagcgaggaatatctacatcaacaacgaatcaccca
caagcattacgcctacatcaagcaagtgcggtcaatttattaccctattttgaacaagga
tgggtgagcgttcaggatctacacgcacaatggtcagccttattactcgaaccggaaaat
aacgaacttattttagacgcttgtgcggcaccgggcggaaagactacacatattttagaa
caagcacccaacgcaaaagtcatcgctttagatattgaacctgctcgtctacaacgtgtg
aaagaaaatttagttcgtatgaaacaacaagctataataatttgtggtgatgcaacccag
ccggagcaatggttatcagagattgattttaatgctataggactgacatttaaatctgaa
agtgcggtgcaatttgaccgaattttattagatgctccttgttccgctaccggtgttatt
cgtcgacaccctgatataaaatggctacgccaagaaagtgatattactcccctagtgcaa
ttgcaaggacaaattttagaagccctttggaaaaaattaaaaccacaaggtattttagtt
tatgcgacctgttctttattacctgaagagaatagtcaacaaattcagcatttcttaacc
aagcacaatgatgcaaaattagaacctttgccttttaccattggggaggaaattggtcat
caatttgttccaacagaacagggaggtgacggtttttattatgccaaattaagaaaactg
cccaattaa
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