Histophilus somni 129PT: HS_0094
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Entry
HS_0094 CDS
T00386
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hso03009
]
HS_0094 (rumA)
Enzymes [BR:
hso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HS_0094 (rumA)
Ribosome biogenesis [BR:
hso03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HS_0094 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
Methyltransf_25
RrnaAD
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_11
TRM5-TYW2_MTfase
DOT1
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ABI24375
UniProt:
Q0I127
LinkDB
All DBs
Position
86590..87909
Genome browser
AA seq
439 aa
AA seq
DB search
MVLLYQPKKQKKLRAAFTTIVQDLDYQGLGVAKIQGKTWFIENALPQEQVQVQVIEEKRQ
YGLGRVQKILQASPLRQTPRCAYYQICGGCQSQHIPIHLQRETKQKALFQRLTKLQKEAI
EFMPMISGEAWHYRRRVRLSLYWDAKSKNLKIGFRQKNSQQIVNIRQCDVLDPLLNELLP
KLHELLSTWSKPKTLGHIELVAADNGVAMLLRVTEKLAEHDRTLLLDFAFNHQVMLFVQD
EKEICHLQGDLPYYQLDDGSILHFDIRDFIQVNRQLNQNMVNTALDWLDLKKKDNVLDLF
CGMGNFTLPISRYVKSAVGIEGVLPMVEKARRNGERNHCHNVQFYQCDLSQSFTEQEWAK
VPFDKILLDPPRSGAAFALNALCYLMAEKIVYVSCNPATLVRDVELLLKFGYQLKKVAMI
DMFPHTSHLESISLFERNR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggttttactttatcagccaaagaaacaaaaaaaattgagagcagcttttacgaccatt
gttcaagatttggattatcaaggattaggtgtagcaaaaattcaaggaaaaacgtggttt
attgagaacgcattaccacaagagcaagtacaggttcaagttattgaagaaaaacgtcaa
tatggactgggtcgagttcaaaagattttacaagccagccctttgcgacaaactccaaga
tgtgcttattatcaaatttgtggcggctgtcaatctcagcatatccctatacatttacaa
cgtgaaacgaaacaaaaagcgttatttcagcgtttaaccaaactgcaaaaagaggctata
gaatttatgccgatgataagtggcgaagcatggcattatcgccgtagagtacgcttaagt
ttgtactgggacgctaaaagtaaaaatttgaagataggctttcggcaaaaaaattcacaa
caaatcgtgaatattcgtcaatgcgatgtgcttgatcccttgttaaatgagttattacct
aaattgcatgagttgttgagtacgtggtctaaaccgaaaacactaggacatattgaatta
gttgccgcagataatggcgtagcgatgttattgagagtaacagaaaaattggctgaacat
gaccgcactttattgttggattttgcatttaatcatcaagtgatgttatttgtacaagat
gaaaaagagatttgtcatttgcaaggagatttgccttattaccaattagatgatggttct
attttacattttgatattcgtgattttattcaggttaatcgccaacttaaccaaaacatg
gtcaatactgcactggattggttggatttgaagaagaaggataatgtgttggatttattt
tgtggtatgggaaattttaccttgccgattagccgatatgtgaaaagtgcggtaggaatt
gagggtgttttacctatggtcgaaaaagcccgtcgtaatggggaacgaaatcattgtcat
aatgtccaattctaccagtgcgatttaagtcaatcttttactgagcaagaatgggcaaag
gttccttttgacaaaatcttactggatccgccgagaagcggtgccgcatttgctttaaat
gcattgtgttatttaatggctgaaaaaatagtgtatgtgtcttgtaatccggcgacatta
gtgcgtgatgtggagcttttgcttaagtttggttatcaattaaaaaaagtcgcaatgatt
gatatgttcccacatacaagtcatctggaaagtattagcttatttgaaaggaacagatag
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