Histophilus somni 129PT: HS_0146
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Entry
HS_0146 CDS
T00386
Symbol
mutM
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hso
Histophilus somni 129PT
Pathway
hso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HS_0146 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_0146 (mutM)
Enzymes [BR:
hso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HS_0146 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HS_0146 (mutM)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HS_0146 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
DUF8259
DZR
Ribosomal_S13
crAss_CARGO2
Zn_ribbon_6
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
ABI24424
UniProt:
Q0I0X6
LinkDB
All DBs
Position
130656..131468
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTFKHVKILNLTRRAKYLI
IHTEQGYIIGHLGMSGSVRIVPHDNPVNKHDHFDIVMNNGKLLRYNDARRFGAWLWTNNL
SEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGVGNIYANEILFLCG
LHPQKIAKTLTKKQAEQLVFTIKQVLNEAIEQGGTTLKDFLQPDGRPGYFAQKLLVYGNK
DKPCPRCGTKIKSIIIGQRNSFFCPQCQKK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaacaaccttaaagggcgtaagcccttatttaaaaggg
tttataattgaaaaaatagtagtacgtaatcccaaattacgctgggaagtaagtaaagaa
ctcagcacatttaaacacgttaaaattcttaacttaactcgtcgagccaagtatctcatt
atccacacggaacaaggttacattatcggacatttaggtatgtccggttcagtccgcatt
gtgccgcatgacaatcctgtcaataagcatgatcatttcgatattgttatgaacaacggc
aagttactacgctataacgatgctcgtcgctttggtgcttggctatggacgaataacctt
agtgaatttcatctttttttcaagttgggaccggaacctttatctgaaacgtttaattct
acttatttgttcaaaaaatctcgtcaaaaaagcaccgcacttaaaactttcttgatggat
aattccgttgttgtaggggttggaaatatttatgcgaatgaaattttatttctatgtgga
cttcatccacaaaagatcgccaaaacattaacaaaaaaacaggctgaacaacttgttttc
actattaaacaagtgcttaacgaagctattgaacaaggaggaacaaccctaaaagatttt
ttacaacctgacggtcgccccggatattttgctcaaaaacttttggtttatggaaataag
gacaagccttgtccaagatgcggtacaaagataaaaagtattattattgggcaaagaaat
agctttttttgtccgcaatgtcaaaaaaagtga
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