| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III, alpha subunit
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| KO |
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| Organism |
hso Histophilus somni 129PT
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hso00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HS_0198 (dnaE)
03430 Mismatch repair
HS_0198 (dnaE)
03440 Homologous recombination
HS_0198 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:hso03032]
HS_0198 (dnaE)
03400 DNA repair and recombination proteins [BR:hso03400]
HS_0198 (dnaE)
Enzymes [BR:hso01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HS_0198 (dnaE)
DNA replication proteins [BR:hso03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HS_0198 (dnaE)
DNA repair and recombination proteins [BR:hso03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HS_0198 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(180055..183531)
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| AA seq |
1158 aa
MSQPRFVHLRVHSDFSMINGITKVKPLIKACVQHEMVAMALTDFTNFCGLVRFYGEAQSS
GVKPIIGADVLVKSDLLGDELFELTLLAKNNEGYHNITLLLSKAYERGYYNLPYIDQSWL
AEHHEGIIILSGGRNGDVGKKLLKNNSADVETAVAFYQEYFPDHFYLSLSRTGRSDEDRY
IQSALILAQQKQLPLVATNDVCFLSPEDFEAHEIRVAIHDGYTLDDPKRPKLYSSQQYFR
SEQEMCELFADIPTALENTVLIAQRCNVTIRLGTYFLPKFPTGDLSPEDFLIQKSKEGLE
ERLQTLFPDPQVRSEKRKEYDDRLQTELDVINKMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPDRVSMPDFDVDFCMDKRDRVIEHVAET
YGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRIAKLIPADPGMTLTKAFEVEPRL
SEIYNNDEEVKALIDMARKLEGVTRNAGKHAGGVVISPSLITDFSPLYCDSEGKHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALDMINARLVKEGKSAVDISTIPLNDPDSFNLLK
KAETTAVFQLESRGMKDLIKKLQPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGVEPV
SYPDVKYQHESLKPILEPTYGVIVYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
AQRDIFEKGAIAKGIDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTSEMDNTDKIVSFYDECLRMGLTIVPPDINTGKHHFSVNDNGEIVYGIGAIKGV
GEVPINAIVSAREQGGIFKDLFDLCARVDLKKVNRRTFENLIKSGAFDKLGPHRAALAQN
LEDALKASDQHAKDEAIGQVDMFGVLTSSHEDVETAYAHTPRWSEKQILDGERETLGLYL
SSHPITRYLKELSHYSSTRLNELSPNTRGKISTVCGLIVALRFAVTKKGNRLGIATLDDR
SGLLDITLFADALERFGDKLQKDTVVIVSGTVSFDDFSQGLKMSVRELMTLDEARSRYAK
NLAISLSQEQITPHFIRQLKGIIEPFSGGSLPIHLYYQSKDGRALIRFGVQWSVYPTDEL
LSALVTMLGENAVELEFD |
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| NT seq |
3477 nt +upstreamnt +downstreamnt
atgtcacagcctcgttttgtacatttgcgtgtacacagtgatttttccatgattaacggc
attactaaggtaaaacctttgataaaagcctgtgtgcaacatgaaatggtggcaatggca
ttgactgattttactaacttttgtggcttagttcgtttttatggtgaagcacaatcttca
ggcgttaagcctattatcggtgctgatgttctcgtgaaaagtgatttgttgggagatgaa
ctttttgaactgacgttattagccaaaaataacgagggttatcataatattaccttatta
ctttcgaaggcttatgaacgtggttattataatttaccttacattgatcagtcttggttg
gcagaacatcatgagggaattatcattttatccggtggtcgcaatggcgatgtagggaaa
aaattactgaaaaataattctgctgatgtggaaactgcggtagctttttatcaagaatat
tttcccgaccacttttatttaagtttaagtcgcaccggtcgatccgatgaagatcgctat
attcaatctgctttaatacttgcacagcaaaaacaattacctttagtagcaacaaatgat
gtgtgttttttaagtccggaggattttgaggcacatgaaatccgagtggctatccatgat
ggttatacactggatgatccgaaacgcccgaaattatacagttcacaacaatatttccgc
tcggagcaagaaatgtgtgagctgtttgctgatattcctaccgcacttgaaaatactgta
ttaatagcacaacgttgtaatgtcaccattcgtttggggacttattttttaccgaaattt
ccaacgggtgacttaagtccggaagattttttaatccaaaaatcgaaagagggattagag
gagcgtttgcagaccctgtttcctgatccgcaagtgcggtcggaaaaacgtaaagaatac
gatgatcgcttacaaaccgaactggatgtcattaataaaatgggctttcccggttatttt
ttgatcgtgatggagtttattcagtggtcaaaagataatgatattcctgtaggaccagga
cgtggttccggagcaggttctttagtcgcctatgcgttaaaaattaccgatttggatcct
cttgaatttgatttgctttttgagcgttttctcaatcctgaccgtgtttctatgccggat
tttgatgtggatttctgtatggacaagcgagatcgtgtgattgagcatgttgcagaaact
tatgggcgtggagcggtttcgcaaatcatcacatttggaacaatggcggcaaaagcggtt
attcgtgatgtggggcgtgtattgggacacccttatggttttgtggatcgtattgctaaa
ttaattcccgccgatccaggtatgaccttgacaaaggcttttgaggtagaaccgagatta
tccgaaatttataacaatgatgaagaagtgaaagccttaattgatatggcaagaaaattg
gagggagtaacacgtaatgcgggtaaacatgcgggcggtgtagttatttctcctagttta
attacagatttctcacctctatattgcgactcggaagggaaacatcctgttacacatttt
gataaaaatgatgttgaatatgcaggattagtgaaatttgactttttaggcttacgcacg
ctgaccattattaaatgggcattggatatgattaacgctcgtttagttaaagagggtaaa
agtgcggtagatatttcgacaattcctttaaatgatcccgattcatttaacttgttgaaa
aaagctgaaaccacagcagtcttccagctggagtcgaggggaatgaaagatcttatcaag
aaacttcagcccgactgttttgaggatattattgcacttgtagcattattccgccccggt
cctttagagtctggaatggtgcaaaactttatcgatcgtaaacacggagtggaacctgtt
tcttatcctgatgttaagtatcaacatgaatcccttaagccgattttagaacctacctat
ggggttattgtttatcaagaacaagtcatgcaaattgcacaagtactggcgggatacagc
cttggcggtgcggatttattgcgtagagcgatgggtaagaaaaaacctgaagaaatggcg
gcacaacgagatatttttgaaaaaggtgcgatagcaaaagggattgatggcgatttagcc
atgaaaatctttgacttagtggaaaaattcgccggttatggttttaataaatctcattct
gccgcttatgctttggtttcttatcaaaccctttggttaaaaacacattatcccgctgaa
tttatggcagcggtgatgacctcagagatggataacacagacaagatcgtgagcttttat
gatgagtgtttacgtatgggtcttactattgttccccctgatattaatacaggcaaacat
cattttagtgtgaatgataatggtgaaattgtttatggtattggtgcgataaaaggcgtt
ggagaagtcccaataaatgcaatagtttcagcccgtgaacaaggcggaatttttaaagat
ttattcgatctttgtgcaagggtcgatttaaaaaaagttaatcgtcgcacctttgaaaat
ctaattaaatccggtgcatttgataaattgggtccacatcgagccgcacttgcccaaaat
ttagaagatgcgttgaaagcatcggatcagcatgcaaaagatgaggcgataggacaggtt
gatatgtttggtgtactaacttcaagccatgaagatgttgaaaccgcttatgcacacacg
ccacgttggagcgagaaacaaattttagacggtgagcgtgaaacattaggtttgtattta
agcagtcatccgattactcgttatttaaaagagttgtctcattacagttcaacacgttta
aatgagttatctccaaacactcgaggcaaaataagtactgtttgcggtttaattgtagca
ttaagatttgcagtgacgaaaaaaggaaaccgattaggtattgcaactttagatgaccgt
tctgggcttttagatataacgttgtttgctgatgctttagaacgctttggtgataaatta
cagaaggataccgttgttattgtttccggtacagtcagttttgatgatttttctcaaggg
ctaaaaatgtctgtacgagagttaatgactttagatgaagctcgtagtcgttatgcaaaa
aatttagccatcagcttatcccaagagcaaataacaccgcactttattcgccaactcaaa
ggaattattgaaccttttagcggcggttctttgccaatacatctttactatcaaagtaaa
gacggacgagctttgatacgcttcggtgtgcaatggtctgtttatccaacagatgagtta
ttgagtgcactggtaacaatgttaggagaaaatgcggttgagcttgaatttgactaa |
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