KEGG   Histophilus somni 129PT: HS_0559
Entry
HS_0559           CDS       T00386                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hso  Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:hso00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hso02048]
    HS_0559 (hsdR)
Enzymes [BR:hso01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HS_0559 (hsdR)
Prokaryotic defense system [BR:hso02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HS_0559 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII HSDR_N EcoR124_C DEAD DUF8156
Other DBs
NCBI-ProteinID: ABI24836
UniProt: Q0I1Z3
LinkDB
Position
complement(593223..596423)
AA seq 1066 aa
MTKKIPELKFEKTLIEYLCTGTITATDNMIGEPPADYVVRTKLWQYEPSIKTTEDLWKNF
KRILEKLNQKTLDRPLSAVEFAQVKRTISNLSTPYAAGQFLYGTNGVSQIEIDLDDDRHV
FLTVFDQKQIGAGDTVYQIVNQIKRPAIIAGKENRQFDTTLLINGLPIIQIEEKKETHDI
NEALNQMHQYIAENQYSDIFSTLQILIAITPNNVKYMANTTADRFNKDFAFNWQRQSDNK
PVYHWKAFADSMLSIPMAHQMATNYMILDGTPNKQTLKVMRPYQVYATRCVMDKLKRADF
DQALNKLGYIWHTTGSGKTITSFKTAWLASRSPKVDKVVFLVDRIALTNQTTENYRAYDP
DATEDSLGSVLDTNNTTDLNRKLHSKGSQIIITSVQKLDTLVKRTSFKAPEKNIVFIVDE
AHRSTGSDNFAAIQKKFKHSAWIGYTGTPMFDDTTKGLRTEDIFGELLHAYTIREAIADR
NVLGFKVDFETTISEKSMKEAHLPKFYRLKYPHWTEEQIALKIANLTQQDMDDSIEPSFY
DENEEHVKLVVEDIFKHWKNRSNWDNKRNRGRYNALLTTHVGGGKASTPMAMMYFREFQR
INKVRSEKGEFLLKVAVTFSQNTSNNDTMLETNQGLFEAIQHYNSEFGTNFTMSDVSAYT
QDVTSRLNRTAVDKKYLDLVIVVDQLLTGFDAPELNTLYVDRTLKGAGLIQAYSRTNRVA
DMREKPWGRIINYRWPAHNEKLMNEALSVYANKDSAKLSDEERKVNNTKDKITAPKYEEL
LDDTKQIVENLREITDNFSQLPPSEAKKWEMLEQLRTYTANIAKIKQYSAEDENGEFIGF
DYENPDKLIQELGMTSEEESMLTNTLSNELKLHLAKSRNVPVIQIELQMTHVKDVEINYD
YLTELISSLLAQVEAGETEKAKETEKELEKFANGLEDRSFAQRINRAAKAIMKGVFKLKD
GFKKDGISIVEQANNATQDQQFLDFRLQWGLTEVITNAQLRQLFAKHQFQQKDLDDNNQL
TDLIKQAGLTYPELAQNDEVKKLTKMKYRNRLRHTIYELADEFVGE
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgactaagaaaatacccgaattaaaatttgaaaaaaccttaattgaatatctttgtaca
ggaacaattacggcaacggataatatgattggcgagccgcctgcggattatgtagtgcgt
accaaattgtggcaatatgagccaagcattaaaacgacggaagatttatggaaaaatttt
aaaagaattttagaaaagctcaatcaaaaaaccttagatcgtcctttaagtgcggtggaa
tttgcacaagttaaacgtactatttctaatttatccacgccttatgccgcagggcagttt
ctttatggcacaaacggtgtgtcacaaattgaaattgatttagatgatgatcgtcatgtg
tttttaaccgtatttgaccaaaaacaaatcggtgcgggcgatacggtgtaccaaattgtg
aatcaaattaaacgaccggcgattattgcaggaaaagaaaatcgacaatttgatactacg
ttgttgattaatggcttgcccattattcaaattgaagaaaagaaagaaacgcatgatatt
aacgaagccttaaatcaaatgcaccaatatatcgcggaaaatcaatacagcgatattttt
tctacgttacaaattctgattgcgattacgccaaacaatgtgaaatatatggcgaatacc
acagcagatcgctttaataaagattttgccttcaactggcaacgtcaatcggacaataaa
ccggtttatcactggaaagcctttgccgattccatgttgagtattcccatggcacatcaa
atggcgactaactatatgattttagatggtacgccgaataagcaaaccctaaaagtaatg
cgaccttatcaagtttatgctacgcgttgtgtgatggataaactcaaacgggcggatttc
gatcaagcgttgaataaactcggttatatttggcataccacaggttcaggcaaaactatt
acgagctttaaaaccgcttggctggcaagtcgttcgccgaaagtggataaagtggttttt
ttagtggatcgtattgcactgactaaccaaactaccgaaaactatcgagcttatgatcct
gatgccacagaagatagtctaggtagtgtactggataccaacaacaccacagatttgaac
cgcaaattacacagcaaaggcagtcaaattattattacctctgtgcaaaaactggatacc
ttggttaaacgcacttctttcaaggcacccgaaaaaaacattgtgtttattgtggatgaa
gctcatcgttctacaggcagtgataattttgctgcgattcaaaaaaaatttaaacattct
gcgtggattggttacaccggcacgccaatgtttgatgacactaccaaaggcttacgaact
gaagatattttcggtgaactcttgcacgcctataccattcgagaagcaattgctgatcgt
aatgtgttgggttttaaagtggattttgaaaccacgattagcgaaaaaagtatgaaagaa
gcacatctaccgaaattctatcgccttaaatatcctcattggacggaagaacaaattgcc
ttgaagattgccaatctcacgcaacaagatatggacgacagcatcgaaccgagtttttat
gacgaaaatgaagaacacgtcaaattagtggtggaagatattttcaaacattggaaaaat
cgctccaattgggataacaaacgtaatcgtggacgatataacgccttgctgaccacgcac
gtgggtggcggcaaagccagtacaccaatggcaatgatgtatttccgtgaattccaacgc
atcaataaagtgcggtcagaaaagggggagtttttgctaaaagttgctgtgacctttagc
caaaataccagcaataacgacaccatgcttgaaaccaaccaaggattattcgaggcaatt
caacattacaacagcgaatttggcactaacttcactatgtctgatgtatcggcttatact
caagatgtcaccagccgtttaaatcgcaccgctgtggacaaaaaatatttagacctcgtg
attgtcgtagatcagttactaacaggatttgacgcccctgaattaaatacgctttatgtt
gaccgcactttaaaaggtgcagggcttattcaagcctattccagaaccaatcgtgtagcg
gatatgcgtgaaaaaccttgggggcggattatcaattaccgctggcctgcccataatgaa
aagttaatgaatgaggcgttgtccgtttacgccaacaaagattccgccaaattatccgat
gaagagcgaaaagtgaataataccaaggataagattactgcaccaaaatacgaagaattg
ctcgatgacaccaaacagattgtggaaaatctgcgagaaataacggataactttagccaa
ttgccaccgtctgaagcgaaaaaatgggaaatgttggaacaattacgcacctataccgcc
aatattgccaaaatcaagcaatattctgcggaagatgaaaatggtgaatttatcggtttt
gattatgaaaatccggataaattgattcaagaactcggcatgaccagtgaagaagaaagt
atgctcaccaacacattgtccaacgaactcaaactgcatttagcaaaaagccgaaatgtg
ccagtgatacaaattgagctacaaatgacccacgttaaagacgtggaaattaattacgat
tacttaactgaattaatttccagcttgttggcacaagtagaggcaggtgaaacggaaaaa
gccaaagaaacggaaaaagaattggaaaaatttgctaacggcttggaagatcgcagtttt
gcacaacgcattaaccgtgcggcaaaagcgattatgaaaggtgtgttcaaattaaaagat
gggtttaaaaaagacggcatttctattgtggaacaagcgaataacgccacccaagatcaa
caatttttggattttcgtctccaatggggattaacggaggtgattaccaacgcccaactt
cgacagctttttgccaaacatcaatttcaacaaaaagatttagatgacaataatcagctt
acggatttaatcaaacaagcaggtctcacttatcccgaacttgcacaaaatgatgaagta
aaaaaactgacaaaaatgaaataccgcaaccggttgcgtcataccatttacgaacttgca
gatgagtttgtgggggaatag

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