Histophilus somni 129PT: HS_0718
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Entry
HS_0718 CDS
T00386
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hso
Histophilus somni 129PT
Pathway
hso03030
DNA replication
hso03410
Base excision repair
hso03420
Nucleotide excision repair
hso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HS_0718 (polA)
03410 Base excision repair
HS_0718 (polA)
03420 Nucleotide excision repair
HS_0718 (polA)
03440 Homologous recombination
HS_0718 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hso03032
]
HS_0718 (polA)
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_0718 (polA)
Enzymes [BR:
hso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HS_0718 (polA)
DNA replication proteins [BR:
hso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HS_0718 (polA)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HS_0718 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HS_0718 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABI24995
UniProt:
Q0I2R5
LinkDB
All DBs
Position
complement(767061..769916)
Genome browser
AA seq
951 aa
AA seq
DB search
MAKIAENPLVLVDGSSYLYRAFYAFPPLTNSLGEPTGAMYGVLNMLKSLIAQVQPTHIAV
VFDAKGKTFRDEIFEQYKSHRPPMPDDLRQQIQPLHNIIKALGIPLLSVEGVEADDVIGT
LAVQASQQGKNVLISTGDKDMAQLVDDNIMLINTMNNSLLDRDGVIDKYGIPPELIVDYL
ALMGDSSDNIPGVSGVGEKTALGLLQGIGSMAEIYANLEKVAGLSIRGAKKLGEKLSSAK
ADADLSYLLATIKTNVELDITPDQLVLGQNNQDQLIEYFARYEFKRWLNEVISGESSLTK
ATQQEIKLDKTQTNSASESKSAVKKTIKIDRTSYETIDTQEKLNSWLEKLQQADLIAVDT
ETDALDPMRANLVGISFALTNSEACYIPLAHKQAVKEMTQTDLFTESEQNAEQFELVKNQ
LNKETCLAQLKPLLENPSIQKVGQNIKYDLTIFANHHIQLNGVCFDTMLQSYVLDSTGRH
NMGALSERYLGHQVIEFESIAGKGKKQVTFDKIAIAQATEYAAEDADITMKLHQVLWQEL
QQSPSLVKVFNDIELPLVKVLSKMERNGVLIDSQALLKQSEKIARRLTALEQQVYQEAGA
EFNLASTKQLQEILFTKLALPIIAKTPKGAPSTNEDVLETLAQQGHIVPKLLMEHRGLAK
LKSTYTDKLPSMVNKKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIKNEEGHCIRQAFIA
RKGYKIIAADYSQIELRIMAHLSQDNGLIMAFNEGKDIHRSTAAEIFGIPLNEVTSEQRR
SAKAINFGLIYGMSSFGLSNQLGISRANAQKYMDLYFQRYPGVQTFMVDIREKAKEQGYV
ETLFGRRLYLPEINSSNAIRRKGAERVAINAPMQGTAADIIKLAMIAIHNEIKKNDIQMI
MQVHDELVFEVKENKVDEYSALIKSLMENAAHLSVPLIVDIGVGDNWDEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattgctgaaaatccgcttgttcttgtagatggttcttcttatttatatcgt
gcattctatgcttttcctccattaacaaattctcttggcgaaccgacaggtgcaatgtat
ggcgtattgaatatgctaaaaagtttaattgctcaggttcaaccgacccatatagcggtt
gtatttgatgcaaagggaaaaacgttccgtgatgaaatatttgaacaatataaatcccat
cgtccccctatgccagatgatttacgtcaacaaattcagccattacacaatattatcaaa
gcactaggaattccgctgttgtctgttgaaggtgtcgaggctgatgatgtaatcggtaca
ttagcggttcaggcctctcagcagggaaaaaacgttctaattagcaccggtgacaaagat
atggcacaattggttgatgataatattatgttgatcaataccatgaataacagtttactg
gatagagatggtgtaatagacaaatatggtattccgcctgaattaattgttgattattta
gcactaatgggcgacagctccgataatattccgggagttagcggtgtcggtgaaaaaaca
gcattgggattgttgcaaggcattgggagtatggcggaaatttatgcaaatttagaaaaa
gtggctggattatcaattcgaggagcaaaaaaactcggggagaaactatcctccgccaag
gcagatgcggatttatcttaccttttagcaacaataaaaaccaacgttgagttagatatt
acaccggatcaactcgtgttagggcaaaataaccaagatcaattgattgaatactttgct
cgttatgaatttaaacgttggctaaacgaagtgataagcggtgaaagctcacttaccaaa
gcaactcagcaagaaattaaacttgataaaactcaaacaaatagtgcctctgagtcgaaa
agtgcggtcaaaaaaacgattaaaatcgaccgcacttcatatgaaactattgatactcaa
gagaaattaaatagttggctggaaaaacttcaacaggcagatcttattgctgttgatacg
gaaaccgatgctttagatcctatgcgtgctaatcttgtcggtatttcctttgcactgacc
aacagcgaggcttgctatattcctctggctcataaacaagctgtaaaagaaatgacacaa
acagatttattcactgaatcagaacaaaatgctgaacaatttgagcttgtaaaaaatcaa
ttaaataaagagacgtgtctagcacaattaaagccgttgctagaaaatccgtctattcaa
aaagttggacaaaatattaaatatgatttaactatttttgccaatcatcatattcaatta
aacggtgtctgttttgatacgatgctacaatcctatgtgcttgacagcacaggacgacat
aatatgggtgccttatcggaacgatatttaggacatcaagttattgaatttgaaagtatt
gccggtaaaggaaaaaaacaagtaacgtttgataaaattgccattgctcaagcgacagaa
tatgctgctgaagatgcggatattacaatgaaattacatcaagtcctctggcaagaatta
caacaatcgccaagtttagtgaaggtatttaatgatattgagttgcctttggtaaaagta
ttatcaaagatggaacgcaatggtgtactaattgatagtcaggcattgttaaagcaatct
gaaaaaattgcgagaagattgaccgcacttgagcaacaagtttatcaagaagcgggagca
gaatttaatttagcttcaaccaaacaactacaagaaattctctttactaaattagcctta
cctatcattgcaaaaaccccaaaaggtgcaccttcaacaaatgaagatgtattggaaacg
ctagctcaacagggacatattgtgcctaaattattgatggaacatcgtggattagcaaaa
ttaaaatctacttacactgataaattgccttcaatggtgaacaaaaaaaccggacgagtg
catacatcttatcatcaagcagtaacagcaacgggacgtttatcttccagtgatcccaat
ttacaaaatattccgattaaaaatgaagaaggtcattgtattcgccaagcctttattgca
cgtaaggggtataaaattattgccgcagactattcacaaattgaattacgaattatggca
catttatctcaagataatggtttgattatggcatttaatgagggaaaagatattcatcgt
tctacggcagctgagattttcggtattccattaaatgaagtaacaagtgaacaacgtcga
agtgcaaaagcaattaactttggcttgatttatggaatgagttcttttggtttatctaat
caacttggtatttcacgggcaaatgctcaaaaatatatggatctatatttccaacgttat
ccgggagtgcaaacttttatggttgatattcgagaaaaagcaaaagagcagggctatgta
gaaacattatttggacgccgtctatatttgcctgaaatcaattcatctaatgcaatacgc
cgtaaaggagctgaacgagtggcgataaatgcaccaatgcagggtactgcggcagatatt
attaaattagctatgattgctattcataacgaaatcaaaaaaaatgatattcaaatgatc
atgcaggttcatgatgaattggtatttgaagtgaaagaaaataaggtagatgaatattct
gcattaattaagtctttaatggaaaatgcggcacatttatcagtcccattaattgtggat
attggtgtgggtgataattgggatgaggcacattaa
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