Histophilus somni 129PT: HS_0736
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Entry
HS_0736 CDS
T00386
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hso03016
]
HS_0736 (rnd)
Enzymes [BR:
hso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HS_0736 (rnd)
Transfer RNA biogenesis [BR:
hso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HS_0736 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF5601
Motif
Other DBs
NCBI-ProteinID:
ABI25011
UniProt:
Q0I2P9
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All DBs
Position
791850..792995
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AA seq
381 aa
AA seq
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MSVLIKEIQNSPQFQLITTNDRLYEICQQAQQKTVIALDTEFVRTKSFYPKLGLIQLYDG
EQVSLIDPFELSDFSPFIQLLANQKVTKVLHACSEDLEVFQHYFQQLPTPMLDTQIMAAF
LQHGNSIGLAILLKHYFKLEIDKGISRTNWLARPLSDVQLHYAAADVWYLLPLYQRMQQK
LAQTSWQSAVQNDCENLLNKYTQIKDSDNAYFSISGAWKLNSQELMRLKLLAKWRQEEAI
KRNLALNFVVRAEHLILLAQHNPKYTSQLLSIGLSPLEVRIHGKKILQLLEKANKAPAYD
YPPPILRVTDDHRYRVAIKLLQATLREITPADLPTEVLSTKRMLDQLIKWHWIKQDNPHD
LPDLLCGWRREFGLLLLKALH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttaataaaagaaatccaaaattcaccgcagtttcaattgattactacaaat
gatcgtttatatgagatttgccaacaggcacaacaaaaaacggtgattgctttggatact
gagtttgttcgcaccaaaagtttttatcccaaactaggattgattcaactttatgacggt
gagcaagtgagcttaatagatccttttgagttgagtgatttttctccttttattcaactt
ttagccaatcaaaaggtcacaaaagtattgcacgcttgcagtgaggatctggaagttttt
caacattattttcagcagttgccaacgccaatgttagatactcaaattatggcggcattt
ttgcaacatggcaattccattggtttagctatattgctaaaacattatttcaagctggaa
atagataaagggatttctcgcactaattggcttgctcgccctttgtctgacgtacaattg
cactatgctgctgccgatgtatggtatttattgccattatatcaacgtatgcaacaaaaa
ttagctcaaacctcttggcaaagtgcggtgcaaaatgattgtgaaaatttgttgaacaaa
tatactcagataaaagatagtgacaatgcttatttttctatatccggagcgtggaaatta
aactctcaggaattaatgcgtttaaagctgttagcaaaatggagacaagaagaagcgata
aagcgtaatcttgcattaaattttgttgttcgtgcagagcatttgattttattagcacaa
cataatccaaaatatacttcacagctgttatccattggtttatctccgctggaagtgcgt
attcatggtaaaaaaatattacaactcttagagaaagcaaacaaagcaccggcgtatgac
tatccaccaccaattttgcgagtcactgatgatcatcgttatcgtgtagcaattaaattg
ttacaagcaacgttacgggaaatcactccggcagatttaccgactgaagttttgtcaact
aagcgtatgttagatcagctgataaagtggcattggattaaacaagacaatcctcatgat
ttacctgatttgctttgcggatggcgtagggagtttggattattgttattaaaggctttg
cattaa
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