Histophilus somni 129PT: HS_0788
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Entry
HS_0788 CDS
T00386
Name
(GenBank) transporter, NhaC family
KO
K18218
tetracycline resistance efflux pump
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hso02000
]
HS_0788
01504 Antimicrobial resistance genes [BR:
hso01504
]
HS_0788
Transporters [BR:
hso02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HS_0788
Antimicrobial resistance genes [BR:
hso01504
]
Gene variants
Tetracycline resistance genes
Transporters
HS_0788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
ABI25063
UniProt:
Q0I2J7
LinkDB
All DBs
Position
843815..845362
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AA seq
515 aa
AA seq
DB search
MELVNYSTSIYSVIPPILALLLAIVTRKVILSLSIGIITGALMLTKDTSILDSMPYLWNH
ISALVYSIEENGSIAFAWDTINIILFLVLLGILTALLTVSGSNQAFAEWAQKRIKGRRGA
KLMAAALVFVTFIDDYFHSLAVGAIARPVTDKFNVSRAKLAYILDSTAAPMCVMMPVSSW
GAYIITLISGLLATYAITDYSPIGAFMAMSSMNFYAIFSILLVFFVAYFSFDIGSMARHE
RLALERGDTEREVEIQTKIKGHVRNLVLPIVVLIVATVAMMMYTGGQALIADGKAFSVLG
AFENTTVGISLVVGGIASVVMVTLCILTDGQISLNEYIKSWGLGAKSMSGAILILCFAWT
INSVVKDMQTGTYLSSLVSGNLPIATLPALLFILGAVMAFSTGTSWGTFGIMLPIAAEIA
SNAAPELMLPCLSAVMAGAVCGDHCSPVSDTTILSSTGAKCNHMDHVTTQLPYALTLAVA
TIVGYLVVGFTLSGLLGFIACAVTLAALMLILRKR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgtaaattattccacatctatttattcggttattccaccgatattagctttg
ctattagccattgtaactcggaaagtcattttatctttaagcattggtattattaccggt
gctttaatgttgaccaaagatacatccatattggatagtatgccttatttgtggaatcat
atctccgctttggtttatagtattgaagaaaacggctcaatcgcatttgcgtgggacaca
ataaatattatcctctttttagttttacttggtattttgaccgcacttttaactgtatcc
ggtagtaaccaagcctttgctgaatgggctcagaaacgtattaaaggtcgtcgtggtgca
aaattaatggcggctgctttggtattcgttacatttattgatgattatttccatagttta
gcggttggtgcaattgcccgtccggttacggataaattcaatgtatctcgagcaaaatta
gcttatattcttgattcaacagcagcccccatgtgcgttatgatgcctgtatccagttgg
ggggcttatatcattaccttgatttcgggactattagcaacttatgccattaccgattac
tctccaatcggtgcatttatggcgatgagttcaatgaatttctatgcaattttctctatt
ttattggtatttttcgtggcttatttttcatttgatattgggtcaatggcgagacatgaa
agattggcattagagagaggggatacagaaagagaagttgaaatacaaacaaagataaaa
gggcatgtacgaaatcttgttttgccaatagtggtattgattgtagcaactgtggcaatg
atgatgtataccggcggacaagcattaattgctgacggtaaagcatttagcgtgctgggt
gcatttgaaaacacaacggtagggatttctctcgttgttggagggattgcctcagtagtg
atggttactctctgtattttaactgatggtcagattagtttaaatgaatatattaaatct
tggggattgggtgcaaaatcgatgtccggtgccattttaattctgtgctttgcatggacg
attaattcggttgtgaaagatatgcaaacagggacatatttatccagccttgtatctggc
aatcttcctattgcaacgttaccggcattacttttcatcctcggtgcagtgatggcattt
tccacaggaaccagctggggaacatttggaataatgctaccaattgccgcagaaattgca
tcaaatgccgcccctgaattaatgttaccttgcttatctgcggtaatggctggtgcagtt
tgtggagatcattgttcccctgtatctgatacaacaattttgtcctctaccggagcgaaa
tgtaaccacatggatcacgtaacaacacaattaccttatgcgttaacattagcagtcgca
accattgtaggttacttagttgttggcttcacattatctggcttattgggttttattgct
tgtgctgttactttagctgctttaatgttaattttaagaaaacgctaa
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