Histophilus somni 129PT: HS_0975
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Entry
HS_0975 CDS
T00386
Symbol
ihfB
Name
(GenBank) integration host factor, beta-subunit
KO
K05788
integration host factor subunit beta
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hso03032
]
HS_0975 (ihfB)
03036 Chromosome and associated proteins [BR:
hso03036
]
HS_0975 (ihfB)
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_0975 (ihfB)
DNA replication proteins [BR:
hso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HS_0975 (ihfB)
Chromosome and associated proteins [BR:
hso03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HS_0975 (ihfB)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HS_0975 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
FliG_C
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
ABI25250
UniProt:
Q0I390
LinkDB
All DBs
Position
complement(1074036..1074320)
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AA seq
94 aa
AA seq
DB search
MTKSELIENLASTNPNVPLKDIENAVKDILEQLSQALENGERIEIRGFGSFSLHFRQSRI
GRNPKTGEKVDLSAKYVPHFKAGKELKERVNIYS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaacttatcgaaaatttagcatcaaccaatcctaacgttcctttgaaa
gatatagaaaatgcagtaaaagacattctagaacaattatcacaagcattagaaaacggt
gaaagaattgaaattcgaggatttggtagtttttcattgcattttcgtcaatctagaata
ggacgtaatccaaaaaccggagaaaaggtagatttaagtgctaaatatgtacctcatttt
aaagccggtaaagaactgaaagagcgtgttaatatttactcgtaa
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