Histophilus somni 129PT: HS_1128
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Entry
HS_1128 CDS
T00386
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hso
Histophilus somni 129PT
Pathway
hso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HS_1128 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_1128 (uvrA)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HS_1128 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HS_1128 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_21
RsgA_GTPase
AAA_23
nSTAND3
AAA_25
NACHT
cobW
BCA_ABC_TP_C
Viral_helicase1
DnaJ_CXXCXGXG
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ABI25403
UniProt:
Q0I418
LinkDB
All DBs
Position
complement(1265826..1268657)
Genome browser
AA seq
943 aa
AA seq
DB search
MEKIDIRGARTHNLKNISLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PEHHVTLSVQTISQMVDKVLSLPEESKMMLLAPVVKNRKGEHIKILENIAAQGYIRARID
GEICDLSDPPKLELQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVADMENS
QVEELIFSANFACPHCGYSIPELEPRLFSFNNPAGACSTCDGLGVQQYFDEKRVVQNASI
SLAGGAIKGWDRRNFYYYQMLMSLAKHYDFDIELPFEKLPKKIQQIILNGSGDEEIEFQY
MNDRGDVVLRRHSFEGILNNMARRYKETESMSVREELSKNISSRPCVDCCGSRLRSEARH
VYIGEANLPDVSEKSIGEALNFIDNLTLTGQRGQIADKILKEIKERLQFLVNVGLSYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLLHLRNLGNT
VIVVEHDEDAIMAADHIIDIGPGAGVHGGNVVAQGNAQEIMANPNSLTGNFLSGKEKIEI
PLKRTAVDKQKMLRLKGASGNNLKQVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQM
RLNRAENSQFAPYQSIEGLEFFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEARVFFDAIPMVARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHCLRDKGNTIVVIEHNLDVIKTADW
IVDLGPEGGNGGGQIIATGTPEEVCLVEGSHTARFLKTMLAKK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattgatattcgtggggcaagaactcacaatctaaaaaatataagtttaaca
attcctcgtaacaaacttgttgtaattacggggctgtctggttcaggaaagtcttctttg
gcttttgatacgttatatgcagaggggcaacgccgttatgtagagtcattgtctgcctac
gctcgccaatttttatctttaatggaaaaacccgatgttgatcatattgaaggattatct
ccggctatttctattgaacaaaaatccacttctcataatcctcgctcaacagtgggaacg
attactgaaattcatgattatttgcgtttattgtttgctcgagtaggtgagccgagatgc
ccagaacatcatgttacattaagcgtgcaaactattagccaaatggttgataaagtgctg
agtttgccggaagaaagtaagatgatgttacttgcaccggtggtcaaaaatcgtaaaggc
gagcatatcaaaattttagaaaatattgccgcacaaggctatattcgggcaaggattgat
ggtgaaatttgtgatttatcggatccgcctaaattagaattacagaaaaaacatacaatt
gaagtggtggttgatcgctttaaagtgcggtctgatttggctactcgtttggctgaatct
tttgaaacagcgttagagttgtccggtgggacagcaatcgttgcggatatggagaattcg
caagtggaagaattgattttttctgctaattttgcttgccctcattgtggttattctatc
cctgaattagagccgaggttgttttcttttaataatcctgccggtgcttgttctacttgt
gacggtttaggcgtgcaacaatattttgatgaaaaacgtgttgtacaaaacgcatcgatt
tctttagccggtggagcgataaaagggtgggatcggcgtaatttttattattaccaaatg
ttgatgtctttagctaagcactatgattttgatattgaactaccttttgaaaagttaccg
aaaaaaattcagcaaattatcttaaacggttcaggtgacgaggaaattgaatttcaatat
atgaacgatcgtggtgatgttgttcttcgccgtcatagttttgaggggattctcaataat
atggctcgccgttataaagaaaccgaatctatgtctgtacgagaggaattgtccaaaaat
attagtagtcgaccttgtgtagattgttgcggttcgagattacgttcggaagctcgccat
gtttatatcggtgaagctaatttacctgatgtatcagagaaaagtatcggagaagcactc
aattttattgataacctgacattgacgggacaacgtgggcaaattgcagacaaaattctg
aaagagattaaagagcggttacaatttttagtaaatgtggggctaagttatttatcttta
tctcgttcagcggaaactttatccggtggagaagcacagcgtattcgtttggcaagtcaa
attggtgcaggactagttggagtaatgtatgtacttgatgaaccctcaatcggtttacac
caacgagataatgagcgtttattaaatactttgttgcatttgcgtaatctaggcaataca
gtgattgtggttgaacatgatgaagatgctatcatggcagctgatcatattattgatatt
ggtcccggagccggtgtgcatggaggaaatgttgttgcacaaggtaatgcacaagaaatt
atggctaatccaaattctttaacaggtaacttcttgtcaggtaaggaaaaaattgaaatt
ccgctgaaacgaaccgcagttgataagcaaaaaatgcttagattaaaaggagcaagcggt
aataacctgaaacaggtgaatttggatattcccgttggtttatttacctgtgtaacaggt
gtatccggttcgggaaaatctaccttaatcaatgatactttatttccattggctcaaatg
cggttaaatcgtgcggaaaattcccagtttgcaccttatcaatcaattgagggacttgag
ttttttgacaaagtgatcgatatagatcaaagtccgataggtagaacgcctcgttccaat
cctgcaacctatacagggttatttacgccaattcgtgagttattttccggcgtgccggag
gctcgagcgagaggttataatccggggagattcagttttaatgtgcgtggcggacgttgt
gaagcctgtcaaggtgatggtgttatcaaggttgaaatgcactttttacctgatgtttat
gtgccttgtgatcaatgtaaaggcaagcgttataatcgagaaacgttggaaattcgttac
aaaggcaaaactatccatcaagtgcttgatatgacagtagaagaagctcgagtgtttttt
gatgctattccaatggtagctcgtaaattacaaacgttgattgacgttggtttatcttat
attcgcttaggtcaatcttcaacaaccttgtctggaggagaagcacaaagagttaaatta
gcaacagagctttctaaacgagatacagggaagacgttatacattttagatgaaccgact
acaggattacattttgccgatattaaacaactcctgaccgtcttacattgtttacgtgat
aagggaaataccatagtggtaattgaacataatctcgatgtaataaaaaccgctgactgg
atcgttgatttaggaccggaagggggaaatggcggaggacaaattattgctaccggcacg
ccggaagaggtttgcctagttgaaggatctcatacggcgagatttttaaaaactatgttg
gctaaaaaataa
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