Histophilus somni 129PT: HS_1140
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Entry
HS_1140 CDS
T00386
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hso03000
]
HS_1140 (gatR)
Transcription factors [BR:
hso03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
HS_1140 (gatR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_24
HTH_PafC
HTH_5
AprA_N
MarR
Fe_dep_repress
CggR_N
CoA_trans
HTH_AsnC-type
Rrf2
EAP30
AbiEi_4
HTH_36
DDRGK
HTH_Mga
DUF977
HTH_20
MarR_2
Put_DNA-bind_N
DUF7342
HTH_23
FeoC
HTH_Crp_2
HTH_IclR
HTH_22
DsrD
NBD_C
HTH_Tnp_ISL3
HTH_7
Penicillinase_R
FaeA
Motif
Other DBs
NCBI-ProteinID:
ABI25415
UniProt:
Q0I406
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Position
complement(1279077..1279868)
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AA seq
263 aa
AA seq
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MNTFERRHQIIELLKENGIVSVNDLAKRFNVSEVSVRTDLRMLEEQGILTRFHGGAAFSN
SNEKPYEKKERNESKETSLEERHGLSHDPKSHIARIAAQLVKEGDTVILDSGSTTLMIAY
ELLKIKNITVITNNLPAAVVLSDSPDITLVICGGTLRHKTRSMHGTITENSLQGIRADIM
FVGADGVDAKIGLTTFNEGYNISSIMADISAKVVAVVDATKFNRNGFNLVLPMQKLDLVI
TDNSLTKEKQLELISVGVPLQLA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttttgaaagacgacatcaaattatagaattactcaaagaaaacggaattgtg
tccgtcaatgatctcgccaaacgatttaatgtatcggaagtttctgtgcgtaccgattta
agaatgctggaagaacaaggaatacttactcgttttcacggaggtgcggcattttcaaat
tcaaatgaaaagccatacgaaaaaaaagaacgaaacgaaagtaaagagacttcacttgaa
gaacgccatggtctttcgcacgatccgaaatcccatattgcccgtattgccgcacaactg
gttaaggaaggtgatactgtcattcttgacagcggcagcactaccttgatgattgcttac
gaattacttaaaattaagaacattactgttattactaacaatcttcctgctgcagtagta
ctatccgattcacctgatattactcttgtaatttgcggcggtacgcttcgtcacaaaacc
cgctcaatgcacggtactattactgaaaattcattacaaggcattcgggctgatattatg
tttgtgggagccgatggtgttgatgccaaaataggactgacaacctttaatgagggctac
aatatcagttcaattatggcagatatttccgccaaagtagtagctgttgttgatgcaaca
aaattcaaccgtaacggctttaaccttgtacttccaatgcaaaaattggatttagtcatt
acagataatagtctgacaaaggaaaaacagctggaattaatttcggtgggtgtaccgtta
cagttagcctag
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