Histophilus somni 129PT: HS_1163
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Entry
HS_1163 CDS
T00386
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hso
Histophilus somni 129PT
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hso03032
]
HS_1163 (gyrA)
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_1163 (gyrA)
Enzymes [BR:
hso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HS_1163 (gyrA)
DNA replication proteins [BR:
hso03032
]
Prokaryotic type
DNA Topoisomerases
HS_1163 (gyrA)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HS_1163 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7526
Motif
Other DBs
NCBI-ProteinID:
ABI25438
UniProt:
Q0I3Y3
LinkDB
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Position
1315768..1318413
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AA seq
881 aa
AA seq
DB search
MTDFTPNVTPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSSNTYN
KAYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPTLLVNGSSGIAVGMAT
NIPPHNLNEVLDGCLAYVDNEEISIDELMQYIPGPDFPTAALINGRKGIEEAYKTGRGKI
YVRAKAEIETNDKGRETIVVTEIPYQVNKAKLVEKIAELVREKKIEGISNVRDVSNKEGN
RVEVEVKRDAVGEVVLNNLYALTQMQVTFGINMVALDHGQPKLLNLKQIIEAFVRHRREV
ITRRTVFELRKARERAHILEGLAIALANIDPVIELIRASKTADEARVGLLSQAWELGNVA
TMLSATGVDSSRPDNLADNLGIIDGKYYLSDEQARAILDLRLQRLTGLEHEKIVTEYQEI
LIEIGKLLHILNSADRLKEVLCEELEKVKEEFGDARRTEITSASGDINLEDLITQEDVIV
TLSHAGYVKYQPLTDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSSRGRLYW
LKVYQLPQANRGARGRPIVNILPLQENERITAILPVAAYEEDKFIVMATAGGLVKKIALT
EFSRPRSSGIIALNLRDEDELIGVDITDGTNEIMLFSSQGRVVRFEENAVRAMGRLATGV
RGIKLALTNDISDDESAVEIEDISDEDTKEPLDLNVDKVVSLVIPKNDGAILTATQNGYG
KRTALSEYPTKSRNTKGVISIKVSDRNGKVVAATQVEENDQIMLITDAGTLVRTRVSEIS
IVGRNTQGVRLIRTAETEQVVSLERVCDTDEDEENIDNNFE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttacccccaacgttactcctgtgagtatagaagaagagcttaaatcttcg
tatcttgattatgcgatgtctgtaattgtcgggcgagctttgcctgatgtacgtgacggt
ttaaaaccggtgcatcggcgtgtgcttttttctatggatcaaagtagcaatacttacaat
aaagcctacgtaaaatctgctcgtgttgtaggggacgttatcggtaaatatcatcctcac
ggtgatagtgcggtgtacgatactattgttcgtatggctcaacctttctcgttacgctat
atgttggttgatggccaaggtaacttcggttcggtagatggtgatgcaccggctgcaatg
cgttacaccgaagtgcgtatgcaaaaaatcacccaagaattactcaccgacttagataaa
gaaacagtggatttttcgccaaactatgatggaaaagaaatgatccctgatgtcttgcca
accaaaattccaacattattggtcaatggttcttctggtatcgctgtgggtatggcaacc
aatattccgccacataatttaaatgaagtattggatggctgtttagcctatgtggataac
gaagaaatcagtattgatgaactaatgcagtatattcctggtcctgacttccctactgcc
gctttaatcaatggacgtaaaggaattgaagaagcatacaaaacaggacgaggaaaaatc
tatgttcgtgcaaaagcggaaattgaaactaacgataaaggtcgagaaaccattgttgtt
actgaaattccgtatcaagtcaataaagcaaaattagtagaaaaaattgcggaactcgtg
cgtgaaaagaaaattgaaggcatcagtaatgtacgagatgtgtcaaataaagagggtaac
cgtgttgaagtagaagttaaacgtgatgcagtcggtgaagtcgtacttaataatctgtat
gccttaacccaaatgcaagtgacgtttgggatcaatatggttgccttggatcatggtcaa
cccaagctattaaatttaaaacaaattattgaagcatttgttcgccatcgccgtgaagtt
attactcgtcgcactgtatttgaacttcgaaaagctcgtgagcgtgcacatattttggaa
ggcttggcaattgccttagcgaatattgatcctgttattgaattaattcgtgcctctaaa
accgctgatgaagctcgtgtcggtttattatctcaagcttgggaattaggtaatgtagca
acaatgctcagtgcaacaggcgtagatagttctcgtccggataatttggctgataactta
ggtatcatcgacggtaaatactatctttccgatgaacaagctcgtgcaatcttagattta
cgcttacaacgcttaacggggcttgaacacgaaaaaattgttactgaatatcaagaaata
ttaattgaaattggcaaacttttacatattctaaacagcgcggatcgtttgaaagaagtc
ttgtgtgaagaactggaaaaagtaaaagaagaatttggtgatgcacgtcgcactgaaatt
acatcggcatccggcgatattaatttagaagatcttattacccaagaagatgtcattgtt
acactttctcatgcaggttatgtaaaatatcaaccgcttacagactatgaggcacaacgc
cgtggcggtaaaggtaaatctgcaactaaaatgaaagatgaagattttattgagcgttta
ttagttgccaatactcatgacactattctttgcttttcaagtcgaggcagattatattgg
ttaaaagtatatcaactaccgcaagcaaatcgaggggctcgtggtcgtcctattgttaat
attctcccattacaagaaaatgaacgtattacagcaattctaccagtggctgcctatgaa
gaggataaatttatcgtcatggcaactgccggagggcttgtgaaaaaaattgcgttaacc
gaatttagtcgccctcgttcaagcggtattatcgcacttaatttacgtgatgaagatgaa
ttaatcggcgttgatattacagatggtaccaatgaaatcatgctcttctcatcacaaggt
cgagtagttcgttttgaggaaaatgcagttcgagcaatgggacgtttagcgacaggggta
cgaggtattaaactggcattaacaaatgatatttccgatgatgaaagtgcggtagaaatt
gaggatatttctgatgaggatacaaaagaacctcttgatctcaatgtagataaagtggtg
tcattggttattccaaaaaatgacggtgcaattctaaccgctacacaaaatggttatgga
aaacgtaccgcactttccgagtatccaaccaaatctcgtaatactaaaggggtcatctca
attaaagtcagtgacagaaatggtaaagtggtcgctgcaacgcaagtagaggaaaatgat
caaattatgctgattaccgatgctggtacattggttcgtacgagagtgagtgaaatcagc
attgtcggacgcaatactcaaggtgttcgactcattcgaacagcggaaacagaacaagtc
gttagcttagaacgagtttgtgatactgatgaagatgaagaaaatatcgataacaatttt
gaatag
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