Histophilus somni 129PT: HS_1223
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Entry
HS_1223 CDS
T00386
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hso
Histophilus somni 129PT
Pathway
hso00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HS_1223 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hso01007
]
HS_1223 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hso03016
]
HS_1223 (aspS)
03029 Mitochondrial biogenesis [BR:
hso03029
]
HS_1223 (aspS)
Enzymes [BR:
hso01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HS_1223 (aspS)
Amino acid related enzymes [BR:
hso01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HS_1223 (aspS)
Transfer RNA biogenesis [BR:
hso03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HS_1223 (aspS)
Prokaryotic type
Other AARSs
HS_1223 (aspS)
Mitochondrial biogenesis [BR:
hso03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HS_1223 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABI25498
UniProt:
Q0I3S3
LinkDB
All DBs
Position
1383619..1385376
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AA seq
585 aa
AA seq
DB search
MRSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEA
SALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSDVLPLDFNQNNTEEQ
RLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
APEVREIMEKMVHGLWLNTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIVDVADIVK
DIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVKINDINAG
LEGVQSPIAKFLTTEKIKAIFDRTSAQSGDILFFGADKWQTATDAMGALRLKLGRDLGLT
HLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTSPKDFTPEQLEANPTSAVANAYDMVING
YEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKTIM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctcattattgcggtgcattgaaccgtagccatattggacaacaagtaatatta
agcggatgggttcataaacgtcgtgatctaggcggtttaatttttattgatatgcgtgat
cgtgaaggtattgtacaagtttgttttgatccgaaatatcaagaagcattgacggaagcc
agtgcattgcgtaatgaattttgtattaaaatcgaaggtgaggttattgctcgtccggat
aatcaaattaataaaaatatggcaacgggcgaggtggaagttgtagctaaagcattgtct
gtttataacgtttcggatgtacttcctttagattttaatcagaataatactgaagaacag
cgtttaaaatatcgttatcttgatttgcgtcgtcctgaaatggctcaacatttaaaaacc
cgtgccaaaattaccgcttttgtacgtcgttatatggatgaaaacggttttttagacatt
gaaaccccaatgcttaccaaggctacgcctgaaggtgcacgagactatttagttccaagt
cgagtacataaaggcaagttttatgctttgccgcaatcaccacagttgtttaagcaacta
ttgatgatgtccggttttgatcgctattaccaaattgtgaagtgtttccgtgatgaagat
ttgcgtgcagatcgtcagccggaatttactcaaattgatgtggaaacttcctttatgact
gcaccggaagtgcgtgaaattatggaaaaaatggtgcatggtttatggctaaataccata
ggcgttgatttaggcaaatttccgacaatgacttggcaagaggcaatggaacgctttggt
tcagataaaccggatttacgtaatccattagaaatagtcgatgtagctgatattgtgaaa
gatatagatttcaacgttttcagcgaccctgcaaatagctcgaacggtcgtgtggctgtc
atccgtgtaccaaacggtataaatatcactcgaaaacaaattgacgaatatactcaattt
gtcggtatttacggtgcgaaagggttagcttgggtaaaaattaatgacatcaacgctgga
ttagaaggcgtacaaagtccaattgcaaaattcttaacgacagaaaaaatcaaagcaatt
tttgaccgcacttctgcccaaagcggtgatattttgttctttggagcggacaaatggcaa
accgctactgacgcaatgggagcgttacgattgaaactaggtcgtgatttaggtttaact
cacttagatgagtggaaacctctttgggttattgatttcccaatgtttgaacgcgatgaa
gaaggtaatttagctgcaatgcaccatccgttcactagtccaaaagatttcacaccggag
caattagaagcaaatccgacaagtgcggtagcaaatgcctatgatatggtcattaatggt
tatgaagtaggtggtggctcagtgcgtattttcgatccaaaaatgcaacaaactgtattt
catattttaggcattgatgaagatcaacagcgtgagaaatttggattcttacttgatgcc
ttaaaattcggcacgcctccacatgcaggtttagcattcggcttagatcgtttaacgatg
ttgttaaccggaacagataatattcgtgatgttatcgcattcccgaaaacaacagccgca
gcttgtttaatgactgacgcaccgagtcttgctaatgaaaaagctttggaagagttggcg
attaaaacaattatgtag
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