KEGG   Histophilus somni 129PT: HS_1264
Entry
HS_1264           CDS       T00386                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
hso  Histophilus somni 129PT
Pathway
hso03030  DNA replication
hso03430  Mismatch repair
hso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HS_1264 (holC)
   03430 Mismatch repair
    HS_1264 (holC)
   03440 Homologous recombination
    HS_1264 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hso03032]
    HS_1264 (holC)
   03400 DNA repair and recombination proteins [BR:hso03400]
    HS_1264 (holC)
Enzymes [BR:hso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HS_1264 (holC)
DNA replication proteins [BR:hso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HS_1264 (holC)
DNA repair and recombination proteins [BR:hso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HS_1264 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi Peptidase_A2_2
Other DBs
NCBI-ProteinID: ABI25539
LinkDB
Position
complement(1450266..1450709)
AA seq 147 aa
MIKQAQFYILSQQQGKNGLFAEESLACDLAASAWRLGKKVLITCETEEQALKLDEALWQR
DPDEFVPHNLSGEMTSYVTPIEISWQGKRNTQRRDILINLQSQLPDFIMSFNQLIDFVPV
DEQLKILARERYKSLRSQGWQLQTENM
NT seq 444 nt   +upstreamnt  +downstreamnt
atgatcaagcaagctcaattttatattctttctcaacaacaaggaaaaaacggacttttt
gcggaagaaagtcttgcttgcgatcttgccgcctccgcttggcggttggggaaaaaagta
ttaatcacttgtgaaacggaagagcaggcattaaaacttgatgaagctttatggcaaaga
gatcctgatgaatttgtaccgcacaatttatccggtgaaatgacttcatacgtaacgccg
atagagatttcttggcaagggaaacgtaatacgcaacgacgggatatactgattaatctg
caatctcaattacctgattttattatgagttttaatcagctaattgattttgtgccagtt
gatgagcagttaaaaattcttgcgagagaacggtataaatcgcttcgttcgcaaggttgg
caattacaaacagaaaatatgtaa

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