Histophilus somni 129PT: HS_1613
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Entry
HS_1613 CDS
T00386
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase precursor
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hso
Histophilus somni 129PT
Pathway
hso00541
Biosynthesis of various nucleotide sugars
hso01100
Metabolic pathways
hso01250
Biosynthesis of nucleotide sugars
Module
hso_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HS_1613 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hso01005
]
HS_1613 (rfaD)
Enzymes [BR:
hso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HS_1613 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hso01005
]
Core region
HS_1613 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
ABI25881
UniProt:
Q0I569
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All DBs
Position
complement(1827809..1828738)
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AA seq
309 aa
AA seq
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MIIVTGGAGLIGSNIIAALNDMGRRDILVVDNLTDGTKFVNLVDLDIADYCDKEDFIASI
IAGDDFGDIDAIFHQGACSATTEWNGKYLMQNNYEYSKELLHYCLLREIPFFYASSAATY
GDKTDFIEERQFEGPLNVYGYSKFLFDEYVRQILPQATSPVCGFKYFNVYGPREQHKGSM
ASVAFHLNNQMLKGENPKLFAGSEHFLRDFVYVGDVAKVNLWAWQHGISGIYNCGTGRAE
SFEQVARAVLNYHGKGEIETIPFPEHLKSRYQEYTQANLTKLRAAGYQAEFKSVAEGVAE
YMQWLNRKS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattattgttacaggtggagcaggattaattggaagtaatatcattgcggcattaaac
gatatgggacgtcgagatattttggtagtggacaacctgactgatgggacaaaatttgtc
aatttggtcgatttggatattgcggattattgtgataaagaagattttattgcctctatc
attgccggtgatgattttggagatattgatgcaattttccatcaaggcgcttgttctgct
acaacagaatggaacggtaaatatttaatgcaaaataattatgaatattcaaaagaacta
ttgcattattgtctattacgtgaaattcctttcttttatgcctcaagtgcggcgacttat
ggcgataaaacagactttattgaagaacgccaatttgaaggtccgttaaatgtttatggc
tattcaaaattcctatttgatgaatacgtgcgtcaaattctgccacaggctacgtcgcct
gtttgtgggttcaaatatttcaatgtatatggtcctcgtgaacaacataagggttcgatg
gcaagtgttgcattccatttaaataatcagatgttgaaaggagaaaatccaaaattattt
gcaggatcagagcattttttgcgtgattttgtttatgtgggcgatgtggcaaaagtgaat
ttgtgggcatggcaacatggtatttcaggcatttataattgtggaacaggtagagcggaa
agttttgaacaagtagcaagagcagtgttgaattatcatggcaaaggtgaaattgaaact
attccattccctgagcatttaaaatcacgttatcaagaatatacacaagctaatttaaca
aaattacgtgccgctggttatcaagcagaatttaagtcggttgccgaaggtgtggcggaa
tatatgcaatggttaaatcgcaagtcttga
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