Histophilus somni 129PT: HS_1711
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Entry
HS_1711 CDS
T00386
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hso
Histophilus somni 129PT
Pathway
hso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HS_1711 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hso03019
]
HS_1711 (recQ)
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_1711 (recQ)
Enzymes [BR:
hso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HS_1711 (recQ)
Messenger RNA biogenesis [BR:
hso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HS_1711 (recQ)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HS_1711 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
BKACE
Motif
Other DBs
NCBI-ProteinID:
ABI25979
UniProt:
Q0I5V8
LinkDB
All DBs
Position
complement(1935345..1937219)
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AA seq
624 aa
AA seq
DB search
MSVEEWKQQKSAVDFSQDSVEKSTALDILHSVFGYQSFRKGQLEVIEATLAKKDSLVIMA
TGGGKSLCYQIPALCFSGLTLVISPLISLMKDQVDQLLANGINADYLNSSQTFEQQQLVQ
NKAMSGKLKLLYISPEKALTTSFFHFISHCKVSFIAVDETHCISQWGHDFRPEYTQLGGL
KASFPDAPIMALTATADQATRQDILIHLKLSNPHIYIGSFDRPNIRYSLVEKFKPMEQLS
QFIAKQKGKSGIIYCNSRNKVERIAESLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQ
IVVATIAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWL
QKVLLEKPDIPQRQIELHKLQSIGEFAESQICRRLVLLNYFGEYQQKPCNNCDICLDPPK
KYDGLVDAQKVMSAIYRVGQRFGAMYIIAVLRGSQNQKIKEYQHDKLSVFGIGKDRSREY
WQSVIRQLIHLGLIKQVIDHFNITLQLTLDSLPILRGEQPLQLATPRISSITNAITIPKR
AVTNYDKDLFARLRFLRKKIADKENIPPYIIFNDATLQEMAQYQPTTEQEMIQINGVGDI
KLKRFAQPFLALIKEHQFFRTTKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgaagaatggaagcaacaaaaaagtgcggtagattttagccaagattctgtg
gaaaaatctaccgcacttgatattttacattctgtttttgggtatcagtccttccgtaaa
ggacaactggaagttatcgaagcaactttagctaaaaaggacagtttagttattatggca
acaggtggcggaaagtccttatgctatcaaattcccgctctttgtttctccggtttaact
ttagtgatttctcctctaatttcattaatgaaagaccaagtagatcagttattagcaaat
ggtataaatgctgattatttaaattctagtcaaacatttgaacaacaacagttggttcaa
aataaagcaatgtcaggaaaattaaagttgctttatatatctccagaaaaagccttaaca
accagcttttttcattttatttctcattgcaaagtcagttttattgccgttgatgaaacc
cattgtatttcacagtggggacatgattttcgcccagaatatactcaattgggaggatta
aaagcaagttttcctgatgctccaataatggcactaactgcaacagcagatcaggcaacc
cgacaagatatccttattcatcttaaattatctaatccccatatttatatcggtagtttt
gatcgtccaaatattcgttactccttagttgaaaaatttaaacctatggagcaactttct
caatttatcgcaaaacaaaaagggaaaagtggaattatttattgtaacagtcgtaataag
gttgaacgaattgcagaaagtctacgccaaaaaggaatatcagctgaagcttatcatgct
ggtatgagtaatgagcaacgagaatttgttcaacgtgcttttcaacatgataatgtacaa
attgttgttgcaacaattgcttttggaatgggaattaataaatctaacgtgcgtttcgtc
gctcattttgatctacctcgaagtatcgaggcatactatcaggaaacaggacgagcgggg
cgagatgatttaccagctgaagctgtcttattttacgaacctgcagattacgcttggtta
caaaaagtacttttagaaaaaccagatataccgcaacgtcaaatagaactacataaatta
caatccataggggaatttgctgaaagccaaatttgtcgtcgtttagttctattaaattac
tttggtgaatatcaacaaaaaccttgtaataactgtgatatttgtttagatcctccgaaa
aaatatgatggattggttgatgcacaaaaagtaatgtcagcaatctatcgagtggggcaa
cgtttcggggcaatgtatattattgctgtactgcgtggttcccaaaatcaaaaaattaaa
gaatatcaacatgataaactaagcgttttcggcattggtaaagatcgtagtagagaatat
tggcaatcagttattcgacaattaatccatttaggtctgataaaacaagtaattgaccat
tttaatataacattacaactcacattagattcattgcctattttacgaggtgaacaacca
ttgcaattagcaacaccaaggatatcttctattactaatgccattactataccaaaaaga
gcggtcacaaattacgataaagatctctttgctcgattacgttttttgcgtaaaaaaata
gcagacaaagaaaatattcctccttatataatatttaacgatgcaacattacaagaaatg
gcacaataccaaccaacaacagaacaagaaatgatacaaattaatggtgtcggcgatatt
aaattaaaacgttttgctcaaccctttcttgcgttaattaaagaacatcaattttttaga
acaacaaaaaaataa
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